DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and Tomm40

DIOPT Version :9

Sequence 1:NP_001259313.1 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001103218.1 Gene:Tomm40 / 53333 MGIID:1858259 Length:361 Species:Mus musculus


Alignment Length:365 Identity:180/365 - (49%)
Similarity:236/365 - (64%) Gaps:25/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVLAASS---GAPGSGASNLGLGLQEPAP------LPSNSGSLTESSSSAEGLD--------- 47
            |||||||||   |.|.....:| :||..|.|      ||...|.|...||:..|.:         
Mouse     1 MGNVLAASSPPAGPPPPPTPSL-VGLPPPPPSPPGFTLPPLGGGLGTGSSTGRGSERTPGAAASG 64

  Fly    48 SLAAAKDAA---LENPGTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNVVPSGY 109
            :.||::|.:   |.||||.||.|:|||::..:..||.|:.:||||||.|||:||:.:..:..|.|
Mouse    65 AAAASEDGSCGCLPNPGTFEECHRKCKELFPVQMEGVKLTVNKGLSNRFQVTHTVALGTIGESNY 129

  Fly   110 RFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQESKVVASQLTTDY 174
            .||.||||||:.|||||||||:||:|.:|:|||.||||.|..||.|.|.|.|:||.|..|:..:|
Mouse   130 HFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQTQQSKFVNWQVDGEY 194

  Fly   175 RGSDYTLSLTVANPSIFTNSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTA 239
            ||||:|.::|:.||.:...||::|..||||:||.||||.||.|.   ..||.:..:||:.|:||.
Mouse   195 RGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYH---RRPGEEGTVMSLAGKYTL 256

  Fly   240 GSSVWSGTLGQSGLHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSN 304
            .:.:.:.||||:|:|..||.|||||||:|.|.|.|.|||::.|:..||:||||||.:|:|.::||
Mouse   257 NNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSASFGYQLDLPKANFLFKGSVNSN 321

  Fly   305 WQIFGVLEKRLAPLPFTLALSGRMNHVKNNFRLGCGLMIG 344
            |.:...|||:|.|||.||:|...:||.||.|..|.||.||
Mouse   322 WIVGATLEKKLPPLPLTLSLCAFLNHRKNKFLCGFGLTIG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_001259313.1 Porin3_Tom40 57..344 CDD:132766 152/286 (53%)
Tomm40NP_001103218.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73 26/72 (36%)
Porin3_Tom40 77..361 CDD:132766 152/286 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846760
Domainoid 1 1.000 313 1.000 Domainoid score I1301
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101105
Inparanoid 1 1.050 337 1.000 Inparanoid score I2368
Isobase 1 0.950 - 0 Normalized mean entropy S1946
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm8783
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - LDO PTHR10802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2855
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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