DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and tomm40l

DIOPT Version :9

Sequence 1:NP_001259313.1 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_998124.1 Gene:tomm40l / 405895 ZFINID:ZDB-GENE-040426-2319 Length:338 Species:Danio rerio


Alignment Length:352 Identity:165/352 - (46%)
Similarity:226/352 - (64%) Gaps:22/352 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVLAASSGA---PGSGASNL-----GLGLQEPAPLPSNSGSLTESSSSAEGLDSLAAAKDAAL 57
            ||:|||||:.:   ||.||..|     |..:...:|:.:.|.|.|....:           :..|
Zfish     1 MGSVLAASAPSPPPPGPGAPGLVSVPPGFTMPPVSPVSAPSSSPTGQQDT-----------EPPL 54

  Fly    58 ENPGTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNVVPSGYRFGATYVGTKEFS 122
            .|||..||.|:|||::..:..||.::.:||||||||||:||:.:|....|.|||||||||||:..
Zfish    55 PNPGGFEECHRKCKEVFPVQMEGVRLTVNKGLSNHFQVNHTVLLSTQADSSYRFGATYVGTKQTG 119

  Fly   123 PTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYTLSLTVAN 187
            |.|||||::||:|..|:|||.||||.:.::|.||..|.|:.|.|..|..|:::|.|:|.::|..|
Zfish   120 PGEAFPVMVGDMDNTGSLNAQVIHQITDKVRSKFVFQTQQQKFVNWQGDTEFKGEDFTAAVTFGN 184

  Fly   188 PSIFTNSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSG 252
            |.:...||:||..||||||.:||||.||.|.   ..||.:..:||:.||||..:.:.:.|||.:|
Zfish   185 PDVLMGSGIVVAHYLQSVTSSLALGGELVYH---RRPGEEGTVMSLAGRYTGSNFIATLTLGGAG 246

  Fly   253 LHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAP 317
            :|..||.||:||||:|.|.|.|.|||::..|..||:|:|||||||:|.:||||.:...|||:|.|
Zfish   247 VHASYYHKANDQLQVGVEYEVSTRMQDTSVTFGYQLDVPKANLVFKGSLDSNWVVGANLEKKLQP 311

  Fly   318 LPFTLALSGRMNHVKNNFRLGCGLMIG 344
            ||.:||||..::|.|:.|:.|.|:.||
Zfish   312 LPLSLALSAYLDHRKHKFQCGFGITIG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_001259313.1 Porin3_Tom40 57..344 CDD:132766 146/286 (51%)
tomm40lNP_998124.1 Porin3_Tom40 54..338 CDD:132766 146/286 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591969
Domainoid 1 1.000 313 1.000 Domainoid score I1271
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 330 1.000 Inparanoid score I2430
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm6454
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2855
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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