DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and tomm40

DIOPT Version :9

Sequence 1:NP_001259313.1 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_012812104.1 Gene:tomm40 / 394730 XenbaseID:XB-GENE-995150 Length:352 Species:Xenopus tropicalis


Alignment Length:347 Identity:176/347 - (50%)
Similarity:232/347 - (66%) Gaps:14/347 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNVLAASSGAPGSGASNLGLGLQEPAP---LPSNSGSLTESSSSAEGLDSLAAAKDAALENPGT 62
            |||||||||.||.:..|....||....|   :|..:| ||.:....|       .::..|.||||
 Frog    17 MGNVLAASSPAPPAAGSPPAPGLVSVPPGFTMPPVAG-LTPTPDKNE-------TQEDRLPNPGT 73

  Fly    63 VEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNVVPSGYRFGATYVGTKEFSPTEAF 127
            .||.|:|||::..|..||.|:.:||||||:|||:|||::|.:..|.|.|||||||||:..|.|||
 Frog    74 FEECHRKCKELFPIQMEGVKLTVNKGLSNYFQVNHTISLSMIGESNYHFGATYVGTKQLGPAEAF 138

  Fly   128 PVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYTLSLTVANPSIFT 192
            |||:||:|.:|:|||.:|||.::.:|.|.|.|.|:||.|..||.|:|||.|:|.::|:.||.|..
 Frog   139 PVLVGDLDNSGSLNAQIIHQVTSNVRSKIALQTQQSKFVNWQLDTEYRGEDFTAAVTLGNPDILV 203

  Fly   193 NSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSGLHVCY 257
            .||::|..||||:||:||||.||.|.   ..||.:..:||:.|||:|.:...:.||||:|.|..|
 Frog   204 GSGILVAHYLQSITPSLALGGELVYH---RRPGEEGTVMSLAGRYSAPNWTATLTLGQAGAHATY 265

  Fly   258 YQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLPFTL 322
            |.||:||||:|.|.|.|.|||::..:..||:|||||||:|:|.:||||.:...|||:|.|||.||
 Frog   266 YHKANDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTL 330

  Fly   323 ALSGRMNHVKNNFRLGCGLMIG 344
            |:...:||.||.|:.|.||.||
 Frog   331 AMGAFLNHKKNKFQCGFGLTIG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_001259313.1 Porin3_Tom40 57..344 CDD:132766 154/286 (54%)
tomm40XP_012812104.1 Porin3_Tom40 68..352 CDD:132766 154/286 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 319 1.000 Domainoid score I1243
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101105
Inparanoid 1 1.050 341 1.000 Inparanoid score I2297
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm9447
Panther 1 1.100 - - LDO PTHR10802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2855
SonicParanoid 1 1.000 - - X1729
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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