DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2LCH and Ftdc1

DIOPT Version :9

Sequence 1:NP_001263106.1 Gene:Fer2LCH / 44965 FlyBaseID:FBgn0015221 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001028576.1 Gene:Ftdc1 / 328695 MGIID:2685659 Length:176 Species:Mus musculus


Alignment Length:178 Identity:33/178 - (18%)
Similarity:63/178 - (35%) Gaps:49/178 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 IEPEIQSYIN------ANLAKSYDYL-------LLATHFNSYQKNRPGFQKLYQGLSDRSFEDSI 114
            |..|..:||:      .||:.:|.:|       ...|.|.:|.:::...:..|          :.
Mouse     9 IPEEALAYIHRIACMQMNLSDAYMFLACLYSDDTTMTSFGAYSQDKASVKWFY----------AK 63

  Fly   115 ALIKQVTRRGGIVDF----NTRHESSGSVSTKRGTLEVD--------ELHSLALALD-------T 160
            .::..:|.||..|..    ....::.|.:......|.::        :|..:||.:.       |
Mouse    64 RILAYITERGNKVCIPEIQRPEIDTQGCIQCAIDILNMENELTEILHDLQDVALTVKDNTTITFT 128

  Fly   161 EKQLATGATHVHSRATHATDAERDPELAHYFEENFLGKQAESVRKLSG 208
            ::.:.|...:....|....:..|..:||.  ||:...|     |:|.|
Mouse   129 KELIYTQRRNEDRLALEIVELRRKEKLAQ--EEDDKNK-----RRLKG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2LCHNP_001263106.1 Euk_Ferritin 60..232 CDD:153114 33/178 (19%)
Ftdc1NP_001028576.1 Ferritin_like 11..154 CDD:294190 24/152 (16%)
Ferritin 14..151 CDD:278632 22/146 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11431
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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