DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer2LCH and LOC102549852

DIOPT Version :10

Sequence 1:NP_001263106.1 Gene:Fer2LCH / 44965 FlyBaseID:FBgn0015221 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_038952292.1 Gene:LOC102549852 / 102549852 RGDID:7625414 Length:134 Species:Rattus norvegicus


Alignment Length:81 Identity:23/81 - (28%)
Similarity:35/81 - (43%) Gaps:17/81 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LDTEKQLATGATHVHSRATHATDAERDPELAHYFEENFLGKQAESVRKLSGYANDLAKLMKVPDP 222
            |..||.|.....::|:..:    |..||.|..:.|.:||.|:.:.::|:   .|.|..|.:|..|
  Rat    52 LAKEKNLNQALLNLHALGS----ARIDPHLCDFLESHFLDKEVKLIKKM---GNHLTNLRRVAGP 109

  Fly   223 ----------SLSVYL 228
                      ||..||
  Rat   110 QPAQTGVAQASLGEYL 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2LCHNP_001263106.1 Euk_Ferritin 60..232 CDD:153114 23/81 (28%)
LOC102549852XP_038952292.1 Ferritin_like 10..127 CDD:469698 23/81 (28%)

Return to query results.
Submit another query.