DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn3 and MICAL-like

DIOPT Version :10

Sequence 1:NP_524801.1 Gene:Actn3 / 44964 FlyBaseID:FBgn0015008 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster


Alignment Length:93 Identity:28/93 - (30%)
Similarity:46/93 - (49%) Gaps:13/93 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 GKTFGDRRLSLLRWCQERVKPY-GIPMYEFSASWISGRALCAIIHSYLPDLIDKTYLAKKKPEEV 502
            |...|....:|..||:...:.| |:.:...:.||.:|.|.|||||.:.|||||   ..:.|.:::
  Fly     6 GTKVGTGTKALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLID---FDRLKADDI 67

  Fly   503 -----LAYGIKVAKSIGVS---DSVDLI 522
                 ||: ....|.:|:.   |:.|::
  Fly    68 YENNDLAF-TTAEKYLGIPALLDAADMV 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Actn3NP_524801.1 SMC_N <13..277 CDD:481474
CH_SF 443..540 CDD:469584 27/89 (30%)
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 26/88 (30%)
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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