DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn3 and Ehbp1

DIOPT Version :10

Sequence 1:NP_524801.1 Gene:Actn3 / 44964 FlyBaseID:FBgn0015008 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_995865.2 Gene:Ehbp1 / 36912 FlyBaseID:FBgn0034180 Length:1141 Species:Drosophila melanogaster


Alignment Length:269 Identity:67/269 - (24%)
Similarity:109/269 - (40%) Gaps:59/269 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 KAMDELCLGKGELQFGLQNKSETDASKDTLVVIDKALSALSQYNTLKFPDCNFQLSRLMKSLYGS 336
            |:.||:...|......|::|:..|        .||.::     :|...|:.|....:..|.....
  Fly   297 KSPDEVKQPKQTPVESLRSKTNED--------FDKMVT-----STPLEPNVNKDDVKPKKKRALF 348

  Fly   337 LTTIRDRWIRKISSAVEPTPSCLKSNTPSLPEPPLTVSFSTDLFWDKIYKPCTQSNPVMPNTSLI 401
            .|...|....::.|..|.|...:..|:.:..:|......|.|           .|:.|:|:..  
  Fly   349 FTEKEDEQDLRVESVKEDTTKTIGDNSTTKEKPKEESQSSKD-----------ASSVVVPSAK-- 400

  Fly   402 PVLPKKQPKSLQLTCEPS------------VQYKVASRSSTTA-------PVPKYLGK--TFGDR 445
              .|:.||.:|:.:.|||            :...:.|..||:.       ||.|.:.|  |.|. 
  Fly   401 --RPELQPLNLKKSYEPSQTPESAPVPASVINESIGSCFSTSGSLNNSLKPVEKIVLKENTPGQ- 462

  Fly   446 RLSLLRWCQERVKPY-GIPMYEFSASWISGRALCAIIHSYLPDLIDKTYLAKKKPEEVLA---YG 506
              .||.||:|..|.| .:.:...:.||.:|.|.|||||.::|:|||   ::|....:|:.   .|
  Fly   463 --DLLEWCKEVTKDYPNVKVTNLTTSWRNGMAFCAIIHHFVPELID---MSKLSAHDVVGNCRIG 522

  Fly   507 IKVAKSIGV 515
            ...|:|:|:
  Fly   523 FDAAESLGI 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Actn3NP_524801.1 SMC_N <13..277 CDD:481474 2/4 (50%)
CH_SF 443..540 CDD:469584 27/77 (35%)
Ehbp1NP_995865.2 NT-C2 12..165 CDD:463058
CH_EHBP 459..563 CDD:409047 28/79 (35%)
bMERB_dom <1027..1122 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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