DRSC/TRiP Functional Genomics Resources

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Protein Alignment Actn3 and F26F4.5

DIOPT Version :10

Sequence 1:NP_524801.1 Gene:Actn3 / 44964 FlyBaseID:FBgn0015008 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_498024.1 Gene:F26F4.5 / 175653 WormBaseID:WBGene00017827 Length:465 Species:Caenorhabditis elegans


Alignment Length:561 Identity:97/561 - (17%)
Similarity:170/561 - (30%) Gaps:261/561 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFTRSLRETFAESQESG---NQEQSSKALVLLRCTRYIKRLSMVLTLLETEEGL----------- 60
            ||||||.. |..|...|   |::..:          |.|::|.|.|.|:.::||           
 Worm     3 LFTRSLNR-FGGSSSEGVPPNEQNIT----------YRKKISAVSTSLQGDDGLVAASPRNCYAR 56

  Fly    61 NKV---NKTLF------------QLDVDTILFELECIVKEALKSLSVSR------FPY------- 97
            |.|   .:.:|            :..|:....|:..:..:...:|...|      .|.       
 Worm    57 NNVISHRRRVFDEPDGATMSSPARTPVEQRAAEIRRMNSQTEANLHKERNHAPPPMPIEGLPPPT 121

  Fly    98 ---QESSCTTTETLVK------ESPICELNKLRLMLKNEKKKQELEIM----------------- 136
               |:.|.|::.:|..      .|||   .::|..:.....||..||:                 
 Worm   122 SQNQKKSRTSSSSLASVFRSRASSPI---ERMRKFIGRSSSKQPKEIVAASPPSTSTTPTPSSTD 183

  Fly   137 GHNLIIMKEKTLVLQARKNQRAAENRLAEKQDRIKALEECLANCKFQLKNVNEQYQKLKKASNQL 201
            .|::|...||.      :|:                    ||..|.:|...|:|...::|     
 Worm   184 NHHIIEELEKV------RNE--------------------LAQTKLKLAEQNKQLHVVQK----- 217

  Fly   202 IRESNQIRPQKSWSVLVGRRKGRISTRTSFVWKSLKLD-QSERETL---------MGLKKRLSE- 255
            :..|.|:      .|:   ....::|.|..:.:..::: .|::|.:         .|.|.|:.: 
 Worm   218 VHCSQQV------DVI---PVANVATMTENLIEEKRVESSSDKENVHPDIICIEDAGYKARIQDL 273

  Fly   256 EKEIKL--RAKTEMSKIRKAMDELCLGKGELQFGLQNKSETDASKDTLVVIDKALSALSQYNTLK 318
            ::||..  |.|:|                      ||:......||.::::.:|:        |:
 Worm   274 QQEIAFLKREKSE----------------------QNEEFRQTRKDFILILKEAV--------LR 308

  Fly   319 FPDCNFQLSRLMKSLYGSLTTIRDRWIRKISSAVEPTPSCLKSNTPSLPEPPLTVSFSTDLFWDK 383
            ..:...||..:.||:|.     .|.|:                                      
 Worm   309 KDEAERQLETISKSIYD-----EDDWV-------------------------------------- 330

  Fly   384 IYKPCTQSNPVMPNTSLIPVLPKKQPKSLQLTCEPSVQYKVASRSSTTAPVPKYLGKTFGDRRLS 448
                                                   .:.|:...|.            ||..
 Worm   331 ---------------------------------------NLTSQHKNTL------------RRNV 344

  Fly   449 LLRWCQERVKPYG--IPMYEFSASWISGRALCAIIHSYLPD 487
            ||.|.||:::.|.  :.:..||:.|...||.||:::...||
 Worm   345 LLMWVQEKLELYSDQLTVSNFSSDWTDCRAFCALLYDLFPD 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Actn3NP_524801.1 SMC_N <13..277 CDD:481474 62/344 (18%)
CH_SF 443..540 CDD:469584 17/47 (36%)
F26F4.5NP_498024.1 CH 343..>411 CDD:214479 15/43 (35%)

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