DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip93F and Lcor

DIOPT Version :9

Sequence 1:NP_001097865.1 Gene:Eip93F / 44936 FlyBaseID:FBgn0264490 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001357696.1 Gene:Lcor / 212391 MGIID:2443930 Length:1696 Species:Mus musculus


Alignment Length:1142 Identity:216/1142 - (18%)
Similarity:360/1142 - (31%) Gaps:410/1142 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IVALERVAEECMGRRQWKHYQDKLTCSHLNIEEQQPIAIAGSEDEPSQYNHSSKEISQ------- 87
            :.|:|.|||                    |.||       |.....||.| |.|.:|:       
Mouse   317 LAAVEEVAE--------------------NTEE-------GGSCIVSQRN-SFKALSEETWDSGF 353

  Fly    88 -SNPNHCKTENHRLEQQHNGS--QLLE--EEDSENNQTSH---------------------DSSR 126
             .|.:....:.:.|:.....|  |.||  |:|:...|.:|                     |.||
Mouse   354 MGNSSSTADKENALQSSSKSSFHQDLETDEQDARPKQENHLHSLGRNKVGFQTYPRDKGHFDHSR 418

  Fly   127 TPTPGATSTPSPPPEPIDWRPSAKCNFCVNGRLLTVNAQGKLVAESAATATSSS-TSNSHIHQHD 190
                |....|||.|         ..:...||     ::|.|:::.|..||..|. .|...|:.:|
Mouse   419 ----GGWLAPSPTP---------TVHRASNG-----HSQTKMMSASIKTARKSKRASGLRINDYD 465

  Fly   191 SDSN----SSASLPHH-------ISSSSSSNNNSSG--------------NRARHI-----AAAS 225
            :..:    |......|       :||..::..::.|              ..||::     .:.|
Mouse   466 NQCDVVYISQPITECHFENQRSILSSRKTARKSTRGYFFNGDCCELPTVRTLARNLCSQDKGSCS 530

  Fly   226 ARATPAAATPANSLELYKLLTQRAAKMT---SMDSMAAQLAQFSLLADFNLINSLASQQQQQQQQ 287
            ..|:.|..||..:      ||...:|.|   .:.::.|||....:           .......|.
Mouse   531 QVASEAVMTPKQT------LTVPTSKHTVGVQLPTVGAQLPTTDV-----------QPPTAGTQL 578

  Fly   288 QIASAVTPT------TSEVSAAAISPAL--KDTPSPSVDAPLDLSSKPSPNSSI---SGDVKSVR 341
            ..|...:||      |::|.:..:...|  .|...|:||..|..:....|...:   :.||:   
Mouse   579 PTADVQSPTVGAQLPTADVQSPTVGAQLPTADVQPPTVDVQLPTADVQPPTGGVQLPTADVQ--- 640

  Fly   342 ACATPTPSGRRAYSEEDLSRA-----LQDVVANKLDARKSASQHH-----EQRSILDNRLFKMKH 396
               .||...:....:..||..     ..||....:.|:..|:...     .|.|.:|.:|..:  
Mouse   641 ---PPTVGAQLPRVDVQLSSVGTQLPTADVQPPTVGAQLPAADVQLPTVDVQISTVDTQLSTV-- 700

  Fly   397 HDQEQDHDGDE-LEDSNDDAEAEVDSNASTPVYPAEFARAQL----RKLSHLSEHNGSD----LG 452
                    |:: |||..||...|               |..|    ...|...:|..::    |.
Mouse   701 --------GEQPLEDICDDPRKE---------------RTSLEGGDEDTSSAKKHQEAEVCLSLR 742

  Fly   453 EDVDRGSPKMGR----HPACGNASANQGAPPSIPLDANVLLHTLMLAAGIGAMPKLDETQTVGDF 513
            |.....||:.|.    .|||                   ||.||:....:..:|           
Mouse   743 EQDPSSSPRPGETTTSSPAC-------------------LLPTLLPNDNMSEVP----------- 777

  Fly   514 IKGLLVANSGGIMNEGLLNLLSASQENSNGNASLLLQQQQHQQHHQQHHQQQQQQQHVAAYRHRL 578
             :|.:|.                    |....|:|..|:|.|....|...::.|.|..    |.:
Mouse   778 -EGSIVV--------------------SPPTESVLSFQEQDQPPASQLGPEEMQAQEC----HLV 817

  Fly   579 PKS-ETPETNSSLDPNDASEDPILK---IPSFKVSGPASSSSLSPGGLVGGHHHPLNNNNSLSIS 639
            |.: .||.|:     .:.|||.:.:   .|...:...:|..|...|..|.     |:....|.:|
Mouse   818 PTAGSTPFTS-----REDSEDLLCRPQSSPKTSIREESSPCSEDEGSTVA-----LDPPLGLELS 872

  Fly   640 NNSNHSSNSHRN----GSNRSPHSASPMLAAAVA---------QGGYSAGNSLLTSSSSSIQKMM 691
            .:...:|.....    |.......:.|:|.:::.         :|..::|...|.:..:. .|..
Mouse   873 EHDQSTSTEAETRDIPGETLLLDDSLPLLESSIVTDENPSEMEEGEATSGTGHLEAHDND-TKYS 936

  Fly   692 ASNIQRQINEQSGQES-----------------LRNGNVSDCSSNNGGSSSLGY----------- 728
            |.|...:.|..|.:|:                 ||: .:.|.||::....|.|.           
Mouse   937 AENDPSEPNSDSPEENVDKKKKARKFPEASDRCLRS-QLGDPSSSDRYPGSQGLDSSAACSEIKV 1000

  Fly   729 -KKPSISVAKIIGGTDTSRFGASPNLLSQQHHS----------AHHLTHQQQQQQLSAQEALGKG 782
             |.|::..:|..|  |:.|..:...::...|..          :.|.:.::.:|:   .|.:|..
Mouse  1001 SKNPAVKHSKREG--DSGRVTSEGPVIDSIHPDNLEDPEDSGVSEHSSDEETKQE---TEGVGVI 1060

  Fly   783 TRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSY---------YGVPHSTLE----YKVKER- 833
            ||               :.||.:...|:.....|:|         ..:|...||    .|:.|| 
Mouse  1061 TR---------------QTVKNMLAKEIKREEGGTYPNSDPATVGQPLPGDNLETHVWSKIDERD 1110

  Fly   834 -HLMR---PRKREPKPQPDLVGLTGPANKLQLDKLKAGPHGGSKLSNALKNQNNQAAA------- 887
             |:..   |.||:|                  :::|..|       ..|..|:.:|||       
Mouse  1111 AHVPSESIPCKRDP------------------EQVKENP-------GHLAIQDTEAAAMSEVDPE 1150

  Fly   888 ---------AAAAAAAAAAAATPNGLKLPLFEAGPQALSFQPNMFWPQT-NATNAY---GLDFNR 939
                     .|..:::..:|:..:|..      ||.....:|......| |..:|:   .||..:
Mouse  1151 DTHHKDDAGLAPCSSSGISASHSDGAD------GPPKSVTRPKRLPSSTYNLRHAHCSNALDTAK 1209

  Fly   940 ITEAMRNPQ---ASNHHGLMKSAQDMVENVYDGIIRK 973
            :|...:..|   |:...|..:||:.:.|...|.::.:
Mouse  1210 MTSEKQGTQVNPAAKEGGASESAEPLDEEDEDSVVEE 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip93FNP_001097865.1 HTH_psq 794..839 CDD:283007 12/62 (19%)
LcorNP_001357696.1 Interaction with nuclear receptors. /evidence=ECO:0000250 53..57
Herpes_BLLF1 <558..823 CDD:282904 67/361 (19%)
PTZ00441 <726..959 CDD:240420 55/298 (18%)
DUF4553 1247..1694 CDD:317502 216/1142 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11390
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002368
OrthoInspector 1 1.000 - - otm44027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21545
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3313
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.130

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