DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Ba and LHS1

DIOPT Version :9

Sequence 1:NP_731716.1 Gene:Hsp70Ba / 44921 FlyBaseID:FBgn0013277 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_012850.1 Gene:LHS1 / 853789 SGDID:S000001556 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:672 Identity:159/672 - (23%)
Similarity:299/672 - (44%) Gaps:105/672 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLG-TTYSCVGVYQHGKVEIIANDQGNRTTPSYVAF-----------TDSERLIGDPAKNQV 56
            :|:|.| .....:.|.....:|::...:..|...|.::.           ...||:.|....:..
Yeast    23 LGVDYGQQNIKAIVVSPQAPLELVLTPEAKRKEISGLSIKRLPGYGKDDPNGIERIYGSAVGSLA 87

  Fly    57 AMNPRNTVFDAKRLIGRKYDDPKIAE--DMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSM 119
            ...|:||:...|.|:|:..:|.....  ..:|...::||..   :..:.:..::..:..||:.:|
Yeast    88 TRFPQNTLLHLKPLLGKSLEDETTVTLYSKQHPGLEMVSTN---RSTIAFLVDNVEYPLEELVAM 149

  Fly   120 VLTKMKETAEAYLGES-------ITDAVITVPAYFNDSQRQATKDAGHI-AGLNVLRIINEPTAA 176
            .:.::...|.:.|.:.       :.....|:|.:|:..||:|..||..| .|:....:::|..:.
Yeast   150 NVQEIANRANSLLKDRDARTEDFVNKMSFTIPDFFDQHQRKALLDASSITTGIEETYLVSEGMSV 214

  Fly   177 ALAYGLDKNL--KGE-RNVLIFDLGGGTFDVSILTI------DEGSLFEVRSTAGDTHLGGEDF- 231
            |:.:.|.:..  .|| ::.:::|:|.|:...|:.:|      .:....|......:.||||..| 
Yeast   215 AVNFVLKQRQFPPGEQQHYIVYDMGSGSIKASMFSILQPEDTTQPVTIEFEGYGYNPHLGGAKFT 279

  Fly   232 -------DNR-LVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEG 288
                   :|: |.||.|..     ..:|.:||:||.::..|||:||..||:::||:|.|::|...
Yeast   280 MDIGSLIENKFLETHPAIR-----TDELHANPKALAKINQAAEKAKLILSANSEASINIESLIND 339

  Fly   289 QDFYTKVSRARFEELCADLFRNTLQPVEKALNDA--KMDKG------QIHDIVLVGGSTRIPKVQ 345
            .||.|.::|..|||..||    :|..:.|.:|||  |...|      :|:.::|.|||:|||.||
Yeast   340 IDFRTSITRQEFEEFIAD----SLLDIVKPINDAVTKQFGGYGTNLPEINGVILAGGSSRIPIVQ 400

  Fly   346 SLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAG-GVMT 409
            ..|.:....:.:..::|.||:...|..::...||  .|.|.:.:.:||.:..:...:.:. ..:.
Yeast   401 DQLIKLVSEEKVLRNVNADESAVNGVVMRGIKLS--NSFKTKPLNVVDRSVNTYSFKLSNESELY 463

  Fly   410 KLIERNCRIPCKQTKTFSTYSDNQP-GVSIQVYEGER---AMTKDNNALGTFDLSGIPPAPRGVP 470
            .:..|....|.| |...:..:|:.| ..:|.::|..:   .:|.::.|:.....|  .....|| 
Yeast   464 DVFTRGSAYPNK-TSILTNTTDSIPNNFTIDLFENGKLFETITVNSGAIKNSYSS--DKCSSGV- 524

  Fly   471 QIEVTFDLDANGILNVS------AKEMSTGKAKNITIKNDKGRLS----QAEIDRM-------VN 518
            ...:||||.::.:.::.      ..|...|.:|.  |||...||:    ..||.|:       ::
Yeast   525 AYNITFDLSSDRLFSIQEVNCICQSENDIGNSKQ--IKNKGSRLAFTSEDVEIKRLSPSERSRLH 587

  Fly   519 EAEKYADEDEKHR-QRITSRNALESYVYNVKQSVEQAPAGKLDEADKN---SVLDKCNETIR--- 576
            |..|..|:.:|.| |...:.|.|||.:|:.:..:..      ||..:|   |.:::.:|.::   
Yeast   588 EHIKLLDKQDKERFQFQENLNVLESNLYDARNLLMD------DEVMQNGPKSQVEELSEMVKVYL 646

  Fly   577 -WL-DSNTTAEKEEFDHKMEEL 596
             || |::...:.|:...::.|:
Yeast   647 DWLEDASFDTDPEDIVSRIREI 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BaNP_731716.1 PTZ00009 2..641 CDD:240227 159/672 (24%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 104/422 (25%)
LHS1NP_012850.1 HYOU1-like_NBD 23..430 CDD:212672 104/418 (25%)
Smc <581..737 CDD:224117 21/94 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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