DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Ba and hspa13

DIOPT Version :9

Sequence 1:NP_731716.1 Gene:Hsp70Ba / 44921 FlyBaseID:FBgn0013277 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001082948.1 Gene:hspa13 / 560481 ZFINID:ZDB-GENE-070410-58 Length:438 Species:Danio rerio


Alignment Length:395 Identity:162/395 - (41%)
Similarity:238/395 - (60%) Gaps:30/395 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVYQ--HGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFD 66
            ||:|||||:..|||:|  .|::|||.:|:|.::.||.|:||.:....|...:....:||:||::|
Zfish    34 IGLDLGTTFCSVGVFQPGTGEIEIIEDDKGRKSIPSVVSFTLTGVFAGHEGQELSDVNPQNTIYD 98

  Fly    67 AKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAY 131
            |||.||:.:|:..:.::...:||||:.:.|.....|. ...:....||.|.|.:|.||::.||..
Zfish    99 AKRFIGKIFDEETLEKESARYPFKVIFNNGSADFLVN-TNSTFTVTPEFIGSRLLLKMRKMAEKQ 162

  Fly   132 LGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196
            ||..:..|||:|||.|::.||..|..|.::|||:|||:||||||||:||||.|  ....|||:.|
Zfish   163 LGVPVEKAVISVPAEFDERQRNYTIRAANLAGLDVLRVINEPTAAAMAYGLHK--AEVFNVLVVD 225

  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKY------KKDLRSNP 255
            |||||.|||:|. .:|.:|..|:.||:..|||:||..||:.:..|..:::|      |:|     
Zfish   226 LGGGTLDVSLLN-KQGGMFLTRAMAGNNQLGGQDFTQRLLQYTTERVRQQYGVPPTLKED----- 284

  Fly   256 RALRRLRTAAERAKRTLSSSTEATIEIDALFE------GQD----FYTKVSRARFEELCADLFRN 310
              :..||.|.|.||..|:......:.:....:      .|:    |..|::|..||||.||||:.
Zfish   285 --IHLLRQAVEAAKLNLTQEPHVHLRVPLYLQMTGASGAQEEKVLFEEKLTRETFEELNADLFQK 347

  Fly   311 TLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQA 375
            .|.|:|..|.:..:||.::.:|||||||||||:::.|:.::| ||..|.|::||.||..|.|:||
Zfish   348 ILAPIETVLVEGHLDKQEVDEIVLVGGSTRIPRIRQLISQYF-GKEPNTSVDPDLAVVTGVAIQA 411

  Fly   376 AILSG 380
            .|:.|
Zfish   412 GIMGG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BaNP_731716.1 PTZ00009 2..641 CDD:240227 162/395 (41%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 161/392 (41%)
hspa13NP_001082948.1 HSPA13-like_NBD 23..430 CDD:212679 162/395 (41%)
PRK13930 32..409 CDD:237564 157/386 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.