DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Ba and hspa4a

DIOPT Version :9

Sequence 1:NP_731716.1 Gene:Hsp70Ba / 44921 FlyBaseID:FBgn0013277 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_999881.1 Gene:hspa4a / 335865 ZFINID:ZDB-GENE-040426-2832 Length:833 Species:Danio rerio


Alignment Length:706 Identity:210/706 - (29%)
Similarity:340/706 - (48%) Gaps:117/706 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVF 65
            |..:|.|:|.....|.|.:.|.:|.:||:..:|.|||:|:|....|.||..||:||..|.:|||.
Zfish     1 MSVVGFDVGFQSCYVAVARAGGIETVANEYSDRCTPSFVSFGPRNRSIGAAAKSQVVTNCKNTVQ 65

  Fly    66 DAKRLIGRKYDDP-------KIAEDMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSMVLTK 123
            ..||..||.:.||       .:..|:...|      .|...|.|.|..|.|.|..|::::|:|||
Zfish    66 GFKRFHGRAFSDPYVETTQSSLVYDLAQMP------NGTTGIKVMYMEEEKLFGIEQVTAMLLTK 124

  Fly   124 MKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKN--- 185
            :|||||:.|.:.:.|.||:||:||.|::|::..||..|||||.||::|:.||.|||||:.|.   
Zfish   125 LKETAESALKKPVADCVISVPSYFTDAERRSVMDAAQIAGLNCLRLMNDTTAVALAYGIYKQDLP 189

  Fly   186 --LKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYK 248
              .:..|.|:..|:|...:.||....::|.| :|..:|.|..|||:|||..||.|..|||.:|||
Zfish   190 APEEKPRTVVFVDVGHAGYQVSACAFNKGKL-KVLGSAFDPELGGKDFDEVLVKHFCEEFAQKYK 253

  Fly   249 KDLRSNPRALRRLRTAAERAKRTLS-SSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTL 312
            .|:||.||||.||....|:.|:.:| :|::..:.|:......|..:|::||:||||||.|.....
Zfish   254 LDVRSKPRALVRLYQECEKLKKLMSANSSDLPLNIECFMNDIDVSSKLNRAKFEELCAGLLAKVE 318

  Fly   313 QPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAI 377
            .|::..:...::.|..|:.:.::||::|||.::..:.:|| ||.|:.::|.|||||.|.|:|.||
Zfish   319 APLQSIMEQTRLKKEDIYAVEIIGGASRIPAIKERISKFF-GKELSTTLNLDEAVARGCALQCAI 382

  Fly   378 LSGDQSGKIQDVLLVDVAPLSLGIETAG----GVMTKLIERNCRI-PCKQTKTFS---TYSDNQP 434
            ||  .:.|:::..:.||.|..:.::...    ||      .:|.: |......||   |:...:|
Zfish   383 LS--PAFKVREFSITDVVPYPISLKWTSAADEGV------SDCEVFPKNHAAPFSKVLTFYRKEP 439

  Fly   435 GVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG-VPQIEVTFDLDANGILNVSA---------- 488
            ......|...:|:...:..:|.|.:..:.|...| ..:::|...::.:|:.:||:          
Zfish   440 FTLEAYYNNPKALPYPDPTIGQFTIHKVVPQASGESSKVKVKVRVNVHGVFSVSSASLVELLKPG 504

  Fly   489 -------------------------------------------KEMSTGKAKNITIKND------ 504
                                                       ::|.|........|||      
Zfish   505 EGEEPMETDTPAKDEENKMQVDQEAQKAQADDQKEQADKKSDTEDMETSPEDKQEKKNDQPPQAK 569

  Fly   505 KGRLSQAEIDR------------------MVNEAEKYADEDEKHRQRITSRNALESYVYNVKQSV 551
            |.::....:|.                  |.||. |...:|:..::|..::|.:|.|||.::..:
Zfish   570 KAKVKTKTVDLPIMNSLQWQLASDALNLFMENEG-KMIMQDKLEKERNDAKNYVEEYVYEMRDKL 633

  Fly   552 EQAPAGKLDEADKNSVLDKCNETIRWL-DSNTTAEKEEFDHKMEELARHCSPIMTK 606
            .......:.||:::|...|..:|..|| :.....:|:.:..|:.||.:...||.::
Zfish   634 HGVLENFVSEAERDSFSLKLEDTENWLYEEGEDQQKQVYIDKLAELKKLGDPIQSR 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BaNP_731716.1 PTZ00009 2..641 CDD:240227 209/705 (30%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 154/388 (40%)
hspa4aNP_999881.1 NBD_sugar-kinase_HSP70_actin 2..384 CDD:302596 154/389 (40%)
HSP70 3..692 CDD:278441 209/704 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.