DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Ba and Hspa12b

DIOPT Version :9

Sequence 1:NP_731716.1 Gene:Hsp70Ba / 44921 FlyBaseID:FBgn0013277 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:648 Identity:147/648 - (22%)
Similarity:235/648 - (36%) Gaps:200/648 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IIANDQGNRTTPSYVAF---TDSERLI-------GDP------AKNQVAMNPRNTVFDAKRLIGR 73
            ::|.|.|  ||.|..||   ||.|.:.       |||      ....:.:.|.. :|.:.....|
  Rat    62 VVAIDFG--TTSSGYAFSFATDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEG-IFHSFGYTAR 123

  Fly    74 KYD---DPKIAEDMKHW-PFKV----VSD----------GGKPKIGVEYKGESKRFAPEEISSMV 120
            .|.   ||:.|.|..:: .||:    .:|          .||..:.:|....:.||..|.    .
  Rat   124 DYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLALEVFAHALRFFKEH----A 184

  Fly   121 LTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGL------NVLRIINEPTAAAL- 178
            |.:::|.:|..|.:.....|:||||.:....:|..::|.::|||      ..|.|..||.||:: 
  Rat   185 LQELREQSECMLEKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAASVY 249

  Fly   179 ----------------AYG--------LDKNLKGERNVL-------------------------- 193
                            |.|        :|.:.:..|..|                          
  Rat   250 CRKLRLHQLMDLSSRTAGGGRLGERRSIDSSFRHAREQLRRSRHSRTFLVESGVGELWSEMQEGD 314

  Fly   194 ---IFDLGGGTFDVSILTIDE--GSLFEV-RSTAGDTHLGGED--FDNRLVTHLAEEFKRKYKKD 250
               :.|.||||.|:::..:::  |:|.|: :::.|.....|.|  |:..|.....|:|..|:|  
  Rat   315 RYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAKFK-- 377

  Fly   251 LRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFE-------------- 301
             |..|.|...|..|.|..|||........:.|...|...|||.|......|              
  Rat   378 -RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWS 441

  Fly   302 ---------ELCADLFRNT----LQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFH 353
                     |...:||:.|    :|.:|..|  ||.:...:..:.||||......:|..:||...
  Rat   442 SQGMLRMSCEAMNELFQPTVSGIIQHIEMLL--AKPEVQGVKLLFLVGGFAESAVLQHAVQEALG 504

  Fly   354 GKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMT--------- 409
            .:.|.:.:..|..:   ..::.|:|.|...|    |:.|..:||:.|:    ||:.         
  Rat   505 NRGLRVVVPHDVGL---TILKGAVLFGQAPG----VVRVRRSPLTYGV----GVLNRFVPGHHPP 558

  Fly   410 -KLIERNCRIPCKQTKTFS-----------------TYSDNQPG---VSIQVY----EGERAMT- 448
             ||:.|:.|..|  |..|.                 :|...:||   |.|.:|    |..|.:| 
  Rat   559 EKLLVRDGRRWC--TDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFITD 621

  Fly   449 ---KDNNAL-------GTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITI 501
               :...||       |:.:.:|..|:.|.:.......|.:    :.|:|.::||.::....|
  Rat   622 PGVRKCGALSLELEPEGSPENTGTSPSRREIRAAMQFGDTE----IKVTAVDVSTNRSVRAAI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70BaNP_731716.1 PTZ00009 2..641 CDD:240227 147/648 (23%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 109/479 (23%)
Hspa12bNP_001381945.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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