DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp70Ab and LHS1

DIOPT Version :9

Sequence 1:NP_524798.2 Gene:Hsp70Ab / 44920 FlyBaseID:FBgn0013276 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_012850.1 Gene:LHS1 / 853789 SGDID:S000001556 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:676 Identity:159/676 - (23%)
Similarity:296/676 - (43%) Gaps:113/676 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLG-TTYSCVGVYQHGKVEIIANDQGNRTTPSYVAF-----------TDSERLIGDPAKNQV 56
            :|:|.| .....:.|.....:|::...:..|...|.::.           ...||:.|....:..
Yeast    23 LGVDYGQQNIKAIVVSPQAPLELVLTPEAKRKEISGLSIKRLPGYGKDDPNGIERIYGSAVGSLA 87

  Fly    57 AMNPRNTVFDAKRLIGRKYDDPKIAE--DMKHWPFKVVSDGGKPKIGVEYKGESKRFAPEEISSM 119
            ...|:||:...|.|:|:..:|.....  ..:|...::||..   :..:.:..::..:..||:.:|
Yeast    88 TRFPQNTLLHLKPLLGKSLEDETTVTLYSKQHPGLEMVSTN---RSTIAFLVDNVEYPLEELVAM 149

  Fly   120 VLTKMKETAEAYLGES-------ITDAVITVPAYFNDSQRQATKDAGHI-AGLNVLRIINEPTAA 176
            .:.::...|.:.|.:.       :.....|:|.:|:..||:|..||..| .|:....:::|..:.
Yeast   150 NVQEIANRANSLLKDRDARTEDFVNKMSFTIPDFFDQHQRKALLDASSITTGIEETYLVSEGMSV 214

  Fly   177 ALAYGLDKNL--KGE-RNVLIFDLGGGTFDVSILTI------DEGSLFEVRSTAGDTHLGGEDF- 231
            |:.:.|.:..  .|| ::.:::|:|.|:...|:.:|      .:....|......:.||||..| 
Yeast   215 AVNFVLKQRQFPPGEQQHYIVYDMGSGSIKASMFSILQPEDTTQPVTIEFEGYGYNPHLGGAKFT 279

  Fly   232 -------DNR-LVTHLA---DEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDAL 285
                   :|: |.||.|   ||        |.:||:||.::..|||:||..||:::||:|.|::|
Yeast   280 MDIGSLIENKFLETHPAIRTDE--------LHANPKALAKINQAAEKAKLILSANSEASINIESL 336

  Fly   286 FEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDA--KMDKG------QIHDIVLVGGSTRIP 342
            ....||.|.::|..|||..||    :|..:.|.:|||  |...|      :|:.::|.|||:|||
Yeast   337 INDIDFRTSITRQEFEEFIAD----SLLDIVKPINDAVTKQFGGYGTNLPEINGVILAGGSSRIP 397

  Fly   343 KVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAG-G 406
            .||..|......:.:..::|.||:...|..::...||  .|.|.:.:.:||.:..:...:.:. .
Yeast   398 IVQDQLIKLVSEEKVLRNVNADESAVNGVVMRGIKLS--NSFKTKPLNVVDRSVNTYSFKLSNES 460

  Fly   407 VMTKLIERNCRIPCKQTKTFSTYADNQP-GVSIQVYEGER---AMTKDNNALGTFDLSGIPPAPR 467
            .:..:..|....|.| |...:...|:.| ..:|.::|..:   .:|.::.|:.....|  .....
Yeast   461 ELYDVFTRGSAYPNK-TSILTNTTDSIPNNFTIDLFENGKLFETITVNSGAIKNSYSS--DKCSS 522

  Fly   468 GVPQIEVTFDLDANGILNVS------AKEMSTGKAKNITIKNDKGRLS----QAEIDRM------ 516
            || ...:||||.::.:.::.      ..|...|.:|.  |||...||:    ..||.|:      
Yeast   523 GV-AYNITFDLSSDRLFSIQEVNCICQSENDIGNSKQ--IKNKGSRLAFTSEDVEIKRLSPSERS 584

  Fly   517 -VNEAEKYADEDEKHR-QRITSRNALESYVFNVK------QAVEQAPAGKLDEADK--NSVLDKC 571
             ::|..|..|:.:|.| |...:.|.|||.:::.:      :.::..|..:::|..:  ...||  
Yeast   585 RLHEHIKLLDKQDKERFQFQENLNVLESNLYDARNLLMDDEVMQNGPKSQVEELSEMVKVYLD-- 647

  Fly   572 NDTIRWL-DSNTTAEKEEFDHKLEEL 596
                 || |::...:.|:...::.|:
Yeast   648 -----WLEDASFDTDPEDIVSRIREI 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70AbNP_524798.2 PTZ00009 2..642 CDD:240227 159/676 (24%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 106/425 (25%)
LHS1NP_012850.1 HYOU1-like_NBD 23..430 CDD:212672 106/421 (25%)
Smc <581..737 CDD:224117 19/95 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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