DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Ab and Hspa12a

DIOPT Version :9

Sequence 1:NP_524798.2 Gene:Hsp70Ab / 44920 FlyBaseID:FBgn0013276 Length:642 Species:Drosophila melanogaster
Sequence 2:XP_006527440.1 Gene:Hspa12a / 73442 MGIID:1920692 Length:695 Species:Mus musculus


Alignment Length:663 Identity:138/663 - (20%)
Similarity:227/663 - (34%) Gaps:216/663 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYS-----------CVGVYQHGKVEIIANDQG--NRTTPSYVAFTDSERLIGDPAKNQ 55
            :.||.|||.|           |:.|.:..:    ..|.|  |:.||:.:..|...:.      :.
Mouse    79 VAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKF------HS 133

  Fly    56 VAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYKGE-----------SK 109
            .....|:...|.         ||   .:.|.|.:.     .|.|:.:...|:           .|
Mouse   134 FGYAARDFYHDL---------DP---SEAKQWLYL-----EKFKMKLHTTGDLTMDTDLTAANGK 181

  Fly   110 RFAPEEISSMVLTKMKETAEAYLGESI------TDA--VITVPAYFNDSQRQATKDAGHIAGL-- 164
            :....||.:..|...||.|...|.:..      :|.  ||||||.:....:|..::|.:.|||  
Mouse   182 KVKALEIFAYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLAS 246

  Fly   165 ----NVLRIINEPTAAAL--------------------AYG------------------------ 181
                ..|.|..||.||::                    .|.                        
Mouse   247 PENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRT 311

  Fly   182 -LDKNLKGE--------RNVLIFDLGGGTFDVSI--LTIDEGSLFEVRSTAGDTH--LGGE-DFD 232
             |.:|:.||        ...::.|.||||.|:::  :.:.||.|.|:....|..:  ||.: :|:
Mouse   312 FLVENVIGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFE 376

  Fly   233 NRLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV-- 295
            ..|.....::|..::|   ...|.|...|..|.|..||..:......:.|...|...|:|.|.  
Mouse   377 KLLCKIFGEDFIEQFK---IKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRG 438

  Fly   296 ---------SRARFEELCAD------------LFRNTLQPVEKALND--AKMDKGQIHDIVLVGG 337
                     |...|.:..:.            ||:.|:..:.:.|.|  .|.:...:..:.||||
Mouse   439 HSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGG 503

  Fly   338 STRIPKVQSLLQDFFHGKNLNLSINPDEAVAYGAAVQAAILSG-DQSGKIQDVLLVDVAPLSLGI 401
            ....|.:|..:|..| |....:.|..|..:   ..::.|:|.| |.:     |:.|..:||:.|:
Mouse   504 FAEAPLLQQAVQTAF-GDKCRIIIPQDVGL---TILKGAVLFGLDPA-----VIKVRRSPLTYGV 559

  Fly   402 ETAGGVMTKLIE--------------RNCR------IPCKQT--------KTFSTYADNQPGVSI 438
                ||:.:.:|              |.|.      |...|:        ::::....:|..:.|
Mouse   560 ----GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIII 620

  Fly   439 QVYEGERAMTKDN---------NALGT--FDLSG----IPPAPRGVPQIEVTFDLDANGILNVSA 488
            .:|..|.    ||         ...||  .||:|    ..||.|.:..|....|.:    :..:|
Mouse   621 NIYSSEH----DNVSFITDPGVKKCGTLRLDLTGSGGTAVPARREIQTIMQFGDTE----IKATA 677

  Fly   489 KEMSTGKAKNITI 501
            .:::|.|:..:.|
Mouse   678 VDITTSKSVKVGI 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70AbNP_524798.2 PTZ00009 2..642 CDD:240227 138/663 (21%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 103/495 (21%)
Hspa12aXP_006527440.1 HSPA12A_like_NBD 77..543 CDD:212685 104/497 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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