DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Ab and lsh1

DIOPT Version :9

Sequence 1:NP_524798.2 Gene:Hsp70Ab / 44920 FlyBaseID:FBgn0013276 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_592867.1 Gene:lsh1 / 2541537 PomBaseID:SPAC1F5.06 Length:848 Species:Schizosaccharomyces pombe


Alignment Length:690 Identity:172/690 - (24%)
Similarity:306/690 - (44%) Gaps:124/690 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVYQHG-KVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDA 67
            :.||.||.::...:.:.| .:||:......|...|.|||..:||:.|..|.|.....|.:::.:.
pombe    25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNV 89

  Fly    68 KRLIG---------RKYDDPKIAEDMKHWPFKVVSDGGKPKIGVEYK-GESKRFAPEEISSMVLT 122
            |.|:.         :||        ...:|...:.:..:...|:.:. .:.:.::.|||.:|.:.
pombe    90 KELLDTAGLESVLVQKY--------QSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMTME 146

  Fly   123 KMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLK 187
            .....||....|.|||.|:|||.:||:.||....:|..|...:||.:|::..|.|:.|.|.::..
pombe   147 HYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFS 211

  Fly   188 GERNV-LIFDLGGGTFDVSILTID--EGS-------LFEVRSTA-GDT-HLGGEDFDNRLVTHLA 240
            .:... :|:|.|.|:...::::.|  |||       :..:|:.| |.| .|.|.:.:.:|:..:.
pombe   212 TDPTYNIIYDSGSGSTSATVISFDTVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMK 276

  Fly   241 DEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCA 305
            :.|.:|:..||..|.|||.||...|.|.|..||:::||...|:.|.:|.||..|::|:..|.||.
pombe   277 NSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCK 341

  Fly   306 DLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQDFFHGKNLNLSINPDEAVAYG 370
            |:....::|:.|||..|.:...:|:.|:|.||::|||.:||.|.|:.....::.::|.|||...|
pombe   342 DMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADEASVKG 406

  Fly   371 AAVQAAILSGDQSGKIQDVLLVDVAP----LSLG------------------------IETAG-- 405
            ||...|.|:  :|.:::.:::.|:..    ||||                        :.|.|  
pombe   407 AAFYGASLT--KSFRVKPLIVQDIINYPYLLSLGTSEYIVALPDSTPYGMQHNVTIHNVSTIGKH 469

  Fly   406 ------------GVMTKL----IERNCRIPCKQTK-TFSTYADNQPGVSIQVYEGERAMTKDNNA 453
                        |..|..    :|:.|....|..: :||  :|...|:.:.:   ...||.::..
pombe   470 PSFPLSNNGELIGEFTLSNITDVEKVCACSNKNIQISFS--SDRTKGILVPL---SAIMTCEHGE 529

  Fly   454 L--------------GTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGK-AKNITIKN 503
            |              |:.|.||:    |......:.|.....|.::.:|..:::.| .:.:.|..
pombe   530 LSSKHKLGDRVKSLFGSHDESGL----RNNESYPIGFTYKKYGEMSDNALRLASAKLERRLQIDK 590

  Fly   504 DKGRLSQA--EIDRMVNEAEKYADEDE------KHRQRITSRNALESYVFNVKQAVEQAPAGKLD 560
            .|.....|  |::.::..|:...|:||      ....:|...:::|||.:.::.. .|:|..::.
pombe   591 SKAAHDNALNELETLLYRAQAMVDDDEFLEFANPEETKILKNDSVESYDWLIEYG-SQSPTSEVT 654

  Fly   561 EADKNSVLDKCNDTIRWLDSNTTAEK------EEFDHKLE 594
            :..|     |.:||::.:.......|      |.|.:.||
pombe   655 DRYK-----KLDDTLKSISFRFDQAKQFNTSLENFKNALE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70AbNP_524798.2 PTZ00009 2..642 CDD:240227 172/690 (25%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 119/397 (30%)
lsh1NP_592867.1 DnaK 19..667 CDD:223520 167/666 (25%)
HYOU1-like_NBD 25..412 CDD:212672 118/394 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.