DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp70Ab and hspa12a

DIOPT Version :9

Sequence 1:NP_524798.2 Gene:Hsp70Ab / 44920 FlyBaseID:FBgn0013276 Length:642 Species:Drosophila melanogaster
Sequence 2:XP_002941887.2 Gene:hspa12a / 100489323 XenbaseID:XB-GENE-959285 Length:664 Species:Xenopus tropicalis


Alignment Length:652 Identity:141/652 - (21%)
Similarity:228/652 - (34%) Gaps:197/652 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYS-----------CVGVYQHGKVEIIANDQG--NRTTPSYVAFTDSERLIGDPAKNQ 55
            :.||.|||.|           |:.:.:..:    ..|.|  |:.||:.:.      |:.|...:.
 Frog    56 VAIDFGTTSSGYAYSFSKEPECIHIMRRWE----GGDPGVSNQKTPTTML------LMPDRKFHS 110

  Fly    56 VAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHW----PFKVVSDGGKPKIGVEYK---GESKRFAP 113
            .....|:...|.         ||   .:.|||    .||:... ....:.:|.:   ...||...
 Frog   111 FGFAARDFYHDL---------DP---SESKHWLYFEKFKMKLH-SSTDLTMETELTAANGKRVKA 162

  Fly   114 EEISSMVLTKMKETAEAYL----GESITDA----VITVPAYFNDSQRQATKDAGHIAGL------ 164
            .||.:..|...||.|...|    |..:..|    ||||||.:....:|..:.|.:.||:      
 Frog   163 LEIFAYALQYFKEQALKELSDQAGSEMDSAEVRWVITVPAIWKQPAKQFMRQAAYKAGMATPENP 227

  Fly   165 NVLRIINEPTAA------------------ALAYGLD-----KNL-------------------- 186
            ..|.|..||..|                  |...|:.     |:|                    
 Frog   228 EQLIIALEPEGASIYCRKLRLHQMIDLSSKAAINGISPTDPAKDLARRNRQSRTFLVENVIGELW 292

  Fly   187 ----KGERNVLIFDLGGGTFDVSI--LTIDEGSLFEVRSTAGDTH--LGGE-DFDNRLVTHLADE 242
                :|:|.|:: |.||||.|:::  :.:.||.|.|:...:|..:  ||.: :|:..|.....|:
 Frog   293 SELEEGDRYVVV-DCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFGDD 356

  Fly   243 FKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV-----------S 296
            |...:|.   ..|.|...|..|.|..||..:......:.|...|...|:|.|.           |
 Frog   357 FIDTFKV---KRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKS 418

  Fly   297 RARFEELCAD------------LFRNTLQPVEKALND--AKMDKGQIHDIVLVGGSTRIPKVQSL 347
            ...|.:..:.            ||:.|:.|:.:.|.:  .|.:...:..:.||||....|.:|..
 Frog   419 NVDFVKWSSQGMLRMNPDAMNALFKPTIDPIIQHLTNLFQKPEVAGVKFLFLVGGFAESPLLQQA 483

  Fly   348 LQDFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDV--APLSLGIETAGGVMTK 410
            :|..| |....:.|..|..:   ..::.|:|.|      .|..|:.|  :||:.|:    ||:.:
 Frog   484 VQQAF-GDQCRVIIPHDVGL---TILKGAVLFG------LDPALIKVRRSPLTYGV----GVLNR 534

  Fly   411 LIE--------------RNC------------RIPCKQT--KTFSTYADNQPGVSIQVYEGERAM 447
            .:|              |.|            .:...:|  ::::....:|..:.|.:|..|:  
 Frog   535 YVEGKHPPEKLLLKDGTRWCTDVFDKFILADQSVALGETVKRSYTPAKQSQLIIIIHIYSSEQ-- 597

  Fly   448 TKDNNAL--------GT--FDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIK 502
             .|.|.:        ||  .||:|...||  ||.......:...|...:.|..:....:||:.:.
 Frog   598 -DDANFITDKGVRKCGTLRLDLTGPESAP--VPSRREIQTIMQFGDTEIKATAVDVATSKNVKVS 659

  Fly   503 ND 504
            .|
 Frog   660 ID 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp70AbNP_524798.2 PTZ00009 2..642 CDD:240227 141/652 (22%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 107/485 (22%)
hspa12aXP_002941887.2 HSPA12A_like_NBD 54..513 CDD:212685 109/493 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.