DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-alpha60 and PRI2

DIOPT Version :9

Sequence 1:NP_652001.2 Gene:DNApol-alpha60 / 44915 FlyBaseID:FBgn0259676 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_012879.1 Gene:PRI2 / 853821 SGDID:S000001528 Length:528 Species:Saccharomyces cerevisiae


Alignment Length:497 Identity:149/497 - (29%)
Similarity:254/497 - (51%) Gaps:52/497 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LKKRARHEVKVEVASLETKYPHNVMLYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVL 69
            |...:..|.|...|.|   |...:..|..||..::.:::||..|::||::|..::...:||..: 
Yeast    39 LSSSSSEEEKKLYARL---YESKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSI- 99

  Fly    70 SDEWKEIVSADLTREGLRSYLRLCSTGGSAKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVA 134
                |||.:  :.:...:..|..        :...::.|::||.|||||||.:|||::|...||.
Yeast   100 ----KEIET--IIKPQFQKLLPF--------NTESLEDRKKDYYSHFILRLCFCRSKELREKFVR 150

  Fly   135 REMELFRYKFAALSSFEVKQFLEANGFE-IHPLTEAQKDEVKDGLYESTVGQSVAKIELLD---- 194
            .|..||:.:|..|:|.:..:|:::.... :..::..:|.|:...||::.......::.|.:    
Yeast   151 AETFLFKIRFNMLTSTDQTKFVQSLDLPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQR 215

  Fly   195 --------FYKVPFTQVLDLVRGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAKTMVED 251
                    |.|:||..|::||..|..|||.||||:.....::|:..:...::.|.|......:..
Yeast   216 KQYFQQEKFIKLPFENVIELVGNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKTYQYLPR 280

  Fly   252 VEADERISRTLKALHNSYTGRDYTVCR--------DAAVPIESL--DQLSKTSMPLCMRMCHEHI 306
            :..|:|:...|..|.:.||..|:...:        |..:..:|:  :::| ::.|||::...|.:
Yeast   281 LNEDDRLLPILNHLSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEIS-SNYPLCIKNLMEGL 344

  Fly   307 RANHHIKHSGRMQYGLFLKGIGVALEDSLRFWREEFTK--KMDADKFTRSYEYNIYHNYGKKGSM 369
            :.|||:::.||.|..|||||||::.:::|:||.|.||:  .|..:||.:.|.|:..||||.:|:.
Yeast   345 KKNHHLRYYGRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNR 409

  Fly   370 VNYTPYSCAKII-KDVAGPGDCHGCPYKNMDQGSLKTKLSSYGLSASAIDEVMFFVSRGHYQIGC 433
            :||.|:.|..|: |...|.||.||||:::.....|..:|.|..|:.:.|..|:....:|.|.|.|
Yeast   410 INYKPWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIAC 474

  Fly   434 GKYFQLTHNSP-------VEPSINHPNNYFEESQIAMGNRQK 468
            .|.|::||||.       .:..|.|||.|||.|:.....:||
Yeast   475 TKVFEMTHNSASADLEIGEQTHIAHPNLYFERSRQLQKKQQK 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-alpha60NP_652001.2 PriL_PriS_Eukaryotic 30..459 CDD:143474 140/461 (30%)
PRI2NP_012879.1 PriL_PriS_Eukaryotic 61..507 CDD:143474 140/461 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346498
Domainoid 1 1.000 172 1.000 Domainoid score I766
eggNOG 1 0.900 - - E1_COG2219
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H731
Inparanoid 1 1.050 232 1.000 Inparanoid score I725
Isobase 1 0.950 - 0 Normalized mean entropy S1310
OMA 1 1.010 - - QHG53502
OrthoFinder 1 1.000 - - FOG0005104
OrthoInspector 1 1.000 - - oto100006
orthoMCL 1 0.900 - - OOG6_102391
Panther 1 1.100 - - LDO PTHR10537
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R981
SonicParanoid 1 1.000 - - X3626
TreeFam 1 0.960 - -
1615.740

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