DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prim2 and spp2

DIOPT Version :10

Sequence 1:NP_652001.2 Gene:Prim2 / 44915 FlyBaseID:FBgn0259676 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_596380.1 Gene:spp2 / 2539933 PomBaseID:SPBC17D11.06 Length:459 Species:Schizosaccharomyces pombe


Alignment Length:451 Identity:158/451 - (35%)
Similarity:248/451 - (54%) Gaps:22/451 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ASLET-KYPHNVMLYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADL 81
            ||.|: .||..:..|..||..::.|:|||..|::||.:|..::.|..||  ...:|...|:...|
pombe    19 ASFESLSYPTRLNFYKKPPVSEISIEEFETWAIDRLVVLGEIESAMLRN--KTKNELNGIIKKIL 81

  Fly    82 -TREGLRSYLRLCSTGGSAKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFA 145
             .|..:.|.:.....|.|...|     ||:|:.||||||||:.||::|...|:..|..|||::|.
pombe    82 DKRLPMSSNMARTVKGNSLDEE-----RRKDHYSHFILRLAFSRSDELRIRFLRAESTLFRFRFV 141

  Fly   146 ALSSFEVKQFLEANGFEIHPLTEAQKDEVKDGLYESTVGQSVAKIELLDFYKVPFTQVLDLVRGR 210
            ...:.|.:.|:::..|:    .|:...|.||..||.....|...||...|:||||.:|.|||..|
pombe   142 NEETRERQAFIDSLDFQ----WESVSQEEKDVFYEKLQASSQRNIENESFFKVPFFKVPDLVERR 202

  Fly   211 RCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAKTMVEDVEADERISRTLKALHNSYTGRDYT 275
            ..|:..|||||...:.||||..:.::.:::.|::....:..::.|:|:...|..|...:...:.:
pombe   203 AVFVHKGYAYVPFSEQVSLVVEEFEENLKKALESTAKSLPRLDEDDRLLPILNHLSKGFVAPESS 267

  Fly   276 VC--RDAAVPIESLDQLSKTSMPLCMRMCHEHIRANHHIKHSGRMQYGLFLKGIGVALEDSLRFW 338
            :.  :..|:....:|.. .:..|||.:..||.::.:.|::|.||:|||||||.||::::::|.||
pombe   268 IVAPKSGAITAGQVDSF-VSHFPLCAKHLHEVLKRDKHLRHFGRLQYGLFLKDIGLSVDEALVFW 331

  Fly   339 REEFTKKMDADKFTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIK-DVAGPGDCHGCPYKNMDQGS 402
            |:.|| .:..|||.:.|.|||.|.||.:|:..||..|:|.:|:. ...||||.|||||:.....:
pombe   332 RKSFT-NVTEDKFNKEYRYNIRHTYGLEGNRKNYKGYNCQQILTGPQLGPGDAHGCPYRTYSVNN 395

  Fly   403 LKTKLSSYGLS--ASAIDEVMFFVSRGHYQIGCGKYFQLTHNS--PVEPSINHPNNYFEES 459
            |.:.|:|.|::  ::...||:..|...||.|.|.:.|:|||.:  .:|.||:||..||:.|
pombe   396 LVSALASMGIAPDSAGCREVVEAVKARHYHIACTRVFELTHPNVGSLEESIHHPLQYFQLS 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prim2NP_652001.2 PriL_PriS_Eukaryotic 30..459 CDD:143474 152/436 (35%)
spp2NP_596380.1 PriL_PriS_Eukaryotic 32..456 CDD:143474 152/436 (35%)

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