DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and CABP1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_016875724.1 Gene:CABP1 / 9478 HGNCID:1384 Length:405 Species:Homo sapiens


Alignment Length:141 Identity:59/141 - (41%)
Similarity:88/141 - (62%) Gaps:5/141 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
            |..|:|.|.::||.:|||:..|.|..|:||..|||:|..|||.||.:|..:...|..|.::|.:|
Human   222 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 286

  Fly    69 CGIMA-KQMRETDT---EEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIREA 128
            ..:|. |.:.||..   .:|:|:||:.||.:|||.||.:|||..|.. ||.:|...:|:|:||:.
Human   287 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDV 351

  Fly   129 DFDGDGMINYE 139
            |.:|||.:::|
Human   352 DLNGDGRVDFE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 59/141 (42%)
CABP1XP_016875724.1 PTZ00184 221..362 CDD:185504 58/139 (42%)

Return to query results.
Submit another query.