DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and MLC1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_011409.1 Gene:MLC1 / 852772 SGDID:S000003074 Length:149 Species:Saccharomyces cerevisiae


Alignment Length:136 Identity:48/136 - (35%)
Similarity:82/136 - (60%) Gaps:6/136 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLI-AEAENNNNGQLNFTEFCGIMAKQM 76
            ||.|..|||:|.|.||...||..:|.:|.|||...:||:| |::...:...|...:..|::....
Yeast     8 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNE 72

  Fly    77 RETDT-----EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMI 136
            :|.|.     .|:..:||::||::..|.:|..:||:::..||||:||.|:||:::..:.|.:|.|
Yeast    73 KELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEI 137

  Fly   137 NYEEFV 142
            :|::|:
Yeast   138 DYKKFI 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 48/136 (35%)
MLC1NP_011409.1 PTZ00184 8..143 CDD:185504 47/134 (35%)

Return to query results.
Submit another query.