DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and AT1G18530

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_173288.1 Gene:AT1G18530 / 838434 AraportID:AT1G18530 Length:157 Species:Arabidopsis thaliana


Alignment Length:144 Identity:57/144 - (39%)
Similarity:90/144 - (62%) Gaps:2/144 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
            |:||.:.||.|.:||.:..|.:...||..|:|:||..|:..::..|:|..::|.||.:.|.|..|
plant     2 EDQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFDELVG 66

  Fly    71 IMAKQMRE--TDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGD 133
            .:...:.|  ....|::.|.||.|||||:||||.|||...|..:|:.:|.:|:.|||:|||.:||
plant    67 TILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGD 131

  Fly   134 GMINYEEFVWMISQ 147
            |:|::.||..::::
plant   132 GVISFGEFASIMAK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 57/144 (40%)
AT1G18530NP_173288.1 PTZ00184 2..143 CDD:185504 57/140 (41%)

Return to query results.
Submit another query.