DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and CAM1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001154755.1 Gene:CAM1 / 833756 AraportID:AT5G37780 Length:175 Species:Arabidopsis thaliana


Alignment Length:172 Identity:95/172 - (55%)
Similarity:124/172 - (72%) Gaps:26/172 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGT--------------------------GKIATRELGTLMRTLGQ 41
            :||:|||:|||:||..|||:|.                          |.|.|:||||:||:|||
plant     4 QLTDEQISEFKEAFSLFDKDGDVFVLSDLGFDFKRLSNCLETTPELSHGCITTKELGTVMRSLGQ 68

  Fly    42 NPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR 106
            |||||||||:|.|.:.:.||.::|.||..:|||:|::||:|||::|||::||:|.:||||.||||
plant    69 NPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 133

  Fly   107 FVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148
            .||.|||||:||||::|||||||.||||.|||||||.::..|
plant   134 HVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 94/170 (55%)
CAM1NP_001154755.1 PTZ00184 1..175 CDD:185504 94/170 (55%)

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