DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Acam and CAM9

DIOPT Version :9

Sequence 1:	NP_001163737.1	Gene:	Acam / 44913	FlyBaseID:	FBgn0011273	Length:	148	Species:	Drosophila melanogaster
Sequence 2:	NP_190760.1	Gene:	CAM9 / 824355	AraportID:	AT3G51920	Length:	151	Species:	Arabidopsis thaliana

Alignment Length:	141	Identity:	58/141 - (41%)
Similarity:	90/141 - (63%)	Gaps:	0/141 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFC 69
            |:|||.||.:||...||:..|.|...:|..:|:::|:||...:||.::::.:...||.:.|.:|.
plant     6 TDEQIQEFYEAFCLIDKDSDGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFL 70

  Fly    70 GIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDG 134
            .|||:...:....:|:.|.|::|||||||.||..||...|.::|.|:|.||.:.|:||||.||||
plant    71 YIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDG 135

  Fly   135 MINYEEFVWMI 145
            .:::.||..|:
plant   136 FLSFHEFSKMM 146

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Acam	NP_001163737.1	PTZ00184	3..148	CDD:185504	58/141 (41%)
		EFh	11..73	CDD:238008	20/61 (33%)
		EFh	84..146	CDD:238008	32/62 (52%)
CAM9	NP_190760.1	PTZ00184	1..148	CDD:185504	58/141 (41%)
		EFh	12..74	CDD:238008	20/61 (33%)
		EFh	85..146	CDD:238008	31/60 (52%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23050
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010