DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and CML41

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_190646.1 Gene:CML41 / 824241 AraportID:AT3G50770 Length:205 Species:Arabidopsis thaliana


Alignment Length:141 Identity:45/141 - (31%)
Similarity:80/141 - (56%) Gaps:5/141 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQ 75
            |.:..|..||.:|.|||:..||.....::|:..:....|:.|.|.:.:.:|.|.|.:|.|:|.::
plant    64 ELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRR 128

  Fly    76 ----MRETDTEEEMREAFKIFD-RDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGM 135
                ..|.|.:.|::.||::|: ..|.|.|:|..|:.:::.|||..|..|.:.||:..|.||:|:
plant   129 DLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNGI 193

  Fly   136 INYEEFVWMIS 146
            :::.||..|::
plant   194 LDFHEFRQMMT 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 45/141 (32%)
CML41NP_190646.1 PTZ00184 54..204 CDD:185504 45/139 (32%)

Return to query results.
Submit another query.