DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and Calm4

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_064420.2 Gene:Calm4 / 80796 MGIID:1931464 Length:148 Species:Mus musculus


Alignment Length:138 Identity:56/138 - (40%)
Similarity:92/138 - (66%) Gaps:1/138 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFC 69
            |:|::|||:.||.:|||...|.|:..|||.:|:.||:|..|.:|:.||::.:.:.:|:::|.||.
Mouse     6 TKEEVAEFQAAFNRFDKNKDGHISVEELGDVMKQLGKNLPEKDLKALISKLDTDGDGKISFEEFL 70

  Fly    70 GIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDG 134
            ..:.| .::.....|:|..|.:.|::|||:|:..||:..:..|||.::.||:::|||.||.|.||
Mouse    71 TAIEK-YKKGHRAGELRAVFNVLDQNGDGYITVDELKESLSKLGESLSQEELEDMIRVADVDQDG 134

  Fly   135 MINYEEFV 142
            .:.|||||
Mouse   135 KVKYEEFV 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 56/138 (41%)
Calm4NP_064420.2 PTZ00184 1..148 CDD:185504 56/138 (41%)

Return to query results.
Submit another query.