DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp4

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_021334000.1 Gene:cabp4 / 797905 ZFINID:ZDB-GENE-081104-291 Length:268 Species:Danio rerio


Alignment Length:149 Identity:55/149 - (36%)
Similarity:90/149 - (60%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            :|..|::.|..:||.:||.:..|.:..:::...|||:|..|||.||.::|.:.:....|.::|.:
Zfish   118 DLLPEELDELLEAFKEFDYDQDGYLHYKDVADCMRTMGYMPTEMELIEIIQQIKMKWGGHVDFDD 182

  Fly    68 FCGIMAKQM-RETDTEEEMRE---AFKIFDRDGDGFISPAELR-FVMINLGEKVTDEEIDEMIRE 127
            ||.:|..:| .||.....:||   |||.||.||||.|:..||: .....||||:...|::|::.:
Zfish   183 FCELMGPRMLAETAHMVGLRELHCAFKQFDCDGDGRITFEELKESTKTLLGEKLKKGELEEILTD 247

  Fly   128 ADFDGDGMINYEEFVWMIS 146
            .|.:|||.::::|||.|:|
Zfish   248 IDLNGDGNVDFDEFVMMLS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 55/149 (37%)
cabp4XP_021334000.1 PTZ00184 130..265 CDD:185504 50/134 (37%)

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