DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cmlc1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_571767.2 Gene:cmlc1 / 64671 ZFINID:ZDB-GENE-030522-1 Length:196 Species:Danio rerio


Alignment Length:146 Identity:55/146 - (37%)
Similarity:87/146 - (59%) Gaps:7/146 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTG--KIATRELGTLMRTLGQNPTEAELQDLIA--EAENNNNGQL 63
            :.:.:||.||:|||..||:..||  ||...:.|.:||.||.|||.|::..::.  :||..|...|
Zfish    46 DFSPDQIEEFRDAFTLFDETPTGEMKIRYAQCGDVMRALGHNPTNADVLTVLGKPKAEEMNTKYL 110

  Fly    64 NFTEFCGIMAKQMRETD--TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIR 126
            :|..|..::....|..|  |.|:..|..::||::|:|.:..||||.|:..||||:|::|:|.::.
Zfish   111 DFETFLPMLQHISRAKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEDEVDRLMA 175

  Fly   127 EADFDGDGMINYEEFV 142
            ..: |.:|.|||..|:
Zfish   176 GQE-DANGCINYTSFI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 55/146 (38%)
cmlc1NP_571767.2 PTZ00184 48..195 CDD:185504 55/144 (38%)

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