DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and tnnc2.2

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_571638.1 Gene:tnnc2.2 / 58082 ZFINID:ZDB-GENE-000322-2 Length:160 Species:Danio rerio


Alignment Length:147 Identity:63/147 - (42%)
Similarity:105/147 - (71%) Gaps:3/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
            |.|:||.:||||.||..||.:|.|.|:|:||||:||.||||||..||:::|.|.:.:.:|.::|.
Zfish    10 SYLSEEMLAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELEEIIEEVDEDGSGSIDFE 74

  Fly    67 EFCGIMAKQMRETD---TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128
            ||..:|.:.::|..   :|||:.|.|::.|::|||:|...|...::.:.||.:::|||||::::.
Zfish    75 EFLVMMVRLLKEDQAGKSEEELAECFRVLDKNGDGYIDRDEFAEIIRSTGESISEEEIDELLKDG 139

  Fly   129 DFDGDGMINYEEFVWMI 145
            |.:.|||::::||:.|:
Zfish   140 DKNNDGMLDFDEFLKMM 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 62/146 (42%)
tnnc2.2NP_571638.1 PTZ00184 12..156 CDD:185504 61/143 (43%)

Return to query results.
Submit another query.