DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and myl4

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001020354.1 Gene:myl4 / 574004 ZFINID:ZDB-GENE-050626-112 Length:187 Species:Danio rerio


Alignment Length:144 Identity:53/144 - (36%)
Similarity:84/144 - (58%) Gaps:7/144 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TEEQIAEFKDAFVQFDKEGTG--KIATRELGTLMRTLGQNPTEAELQDLIAE--AENNNNGQLNF 65
            |.:||.|||:.|:.||:....  ||...:.|.:||.||.|||.||:..::.:  .|..|...::|
Zfish    39 TADQIEEFKETFMLFDRTPASEMKITYAQCGDVMRALGLNPTNAEVLKVLGKPRPEEMNTKMIDF 103

  Fly    66 TEFCGIMAKQMRETD--TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128
            ..|..:.....|..|  |.|:..|..::||::|:|.:..||||.|:..||||:|:.|:::::...
Zfish   104 ETFLPMFQHVSRSKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTESEVEQLMAGQ 168

  Fly   129 DFDGDGMINYEEFV 142
            : ||:|.:|||.||
Zfish   169 E-DGNGCVNYEAFV 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 53/144 (37%)
myl4NP_001020354.1 PTZ00184 39..186 CDD:185504 53/144 (37%)

Return to query results.
Submit another query.