DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Myl1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_008765516.1 Gene:Myl1 / 56781 RGDID:1598796 Length:212 Species:Rattus norvegicus


Alignment Length:136 Identity:50/136 - (36%)
Similarity:81/136 - (59%) Gaps:5/136 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENN--NNGQLNFTEFCGIMA 73
            |||:||:.||:.|..||...::|.::|.||.|||.||::.::....|.  |..::.|.:|..:|.
  Rat    72 EFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMMQ 136

  Fly    74 KQMRETDT--EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMI 136
            ......|.  .|:..|..::||::|:|.:..||||.|:..||||:.:||::.::...: |.:|.|
  Rat   137 AISNNKDQGGYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALLAGQE-DSNGCI 200

  Fly   137 NYEEFV 142
            |||.||
  Rat   201 NYEAFV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 50/136 (37%)
Myl1XP_008765516.1 PTZ00184 72..211 CDD:185504 50/136 (37%)

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