DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp2b

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_021336936.1 Gene:cabp2b / 559616 ZFINID:ZDB-GENE-081028-55 Length:262 Species:Danio rerio


Alignment Length:150 Identity:62/150 - (41%)
Similarity:97/150 - (64%) Gaps:9/150 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            ||..|:|.|.::||.:||: ..|.|..|:||..|||:|..|||.||.:|   ::....|:::|.:
Zfish   117 ELRPEEIEELREAFKEFDR-NKGYINCRDLGECMRTMGYMPTEMELIEL---SQTITGGKIDFED 177

  Fly    68 FCGIMAKQMRETDTE----EEMREAFKIFDRDGDGFISPAELRFVMINL-GEKVTDEEIDEMIRE 127
            |..:|..:|.....:    :|:|:|||.||.:|||.||..|||..|..| ||::...:||:::|:
Zfish   178 FVELMGPKMLAETADMIGVKELRDAFKEFDSNGDGQISVTELREAMKKLMGEQLNSRDIDDILRD 242

  Fly   128 ADFDGDGMINYEEFVWMISQ 147
            ||.:|||::::||||.|:|:
Zfish   243 ADLNGDGLVDFEEFVRMMSR 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 62/149 (42%)
cabp2bXP_021336936.1 PTZ00184 117..260 CDD:185504 60/146 (41%)

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