DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and efcab2

DIOPT Version :9

Sequence 1:NP_001163737.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001314837.1 Gene:efcab2 / 558031 ZFINID:ZDB-GENE-070521-5 Length:162 Species:Danio rerio


Alignment Length:147 Identity:52/147 - (35%)
Similarity:83/147 - (56%) Gaps:8/147 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNN-NGQLNFTEF 68
            |:::|.   :||..||.|....:..||:||::|:||..|:||||.|:|:|.|... .|.:.:.:|
Zfish    14 TQKRIG---NAFDVFDHESNKTVDVREIGTIIRSLGCFPSEAELHDIISELEEEEPTGFVRYEKF 75

  Fly    69 CGIMAKQMRETD----TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREAD 129
            ...|.|.:.|..    ||:.:.:||::.|:...|.:.||||...:...||..|.||:|||:..|.
Zfish    76 LPTMTKILLERKFRPITEDLLIQAFEVLDQQKKGHLEPAELAKYLTQEGEPFTQEEMDEMLSAAV 140

  Fly   130 FDGDGMINYEEFVWMIS 146
            .....:|.|::||.|::
Zfish   141 DPDKNVIFYKDFVSMMT 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_001163737.1 PTZ00184 3..148 CDD:185504 52/147 (35%)
EFh 11..73 CDD:238008 23/62 (37%)
EFh 84..146 CDD:238008 22/61 (36%)
efcab2NP_001314837.1 PTZ00184 7..157 CDD:185504 52/145 (36%)
EFh 96..157 CDD:298682 22/60 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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