DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp5b

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001018568.1 Gene:cabp5b / 553766 ZFINID:ZDB-GENE-050522-146 Length:169 Species:Danio rerio


Alignment Length:149 Identity:64/149 - (42%)
Similarity:96/149 - (64%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
            |.:|:|.|.::||.:|||:..|.|:.::||.||||:|..|||.||.:|......|..|.::|.:|
Zfish    20 LADEEIDELREAFTEFDKDKDGLISCKDLGNLMRTMGYMPTEMELIELSQNINMNLGGSVDFQDF 84

  Fly    69 CGIMA-KQMRETDTE---EEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIREA 128
            ..:|| |.:.||...   :|:::|||.||.||||.|:..|||..|:. |||.....|::.::||.
Zfish    85 VDLMAPKLLAETAGMIGIKELKDAFKEFDMDGDGSITTEELRLAMLKLLGENTNRREVEAVVREV 149

  Fly   129 DFDGDGMINYEEFVWMISQ 147
            |.:|||.:::||||.|:|:
Zfish   150 DNNGDGTVDFEEFVKMMSK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 64/149 (43%)
cabp5bNP_001018568.1 PTZ00184 20..166 CDD:185504 62/145 (43%)

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