DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Myl12a

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_006245729.1 Gene:Myl12a / 501203 RGDID:1309537 Length:178 Species:Rattus norvegicus


Alignment Length:136 Identity:51/136 - (37%)
Similarity:78/136 - (57%) Gaps:4/136 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
            :.||.|||:||...|:...|.|...:|..::.::|:|||:..|..::.||.    |.:|||.|..
  Rat    34 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLDAMMNEAP----GPINFTMFLT 94

  Fly    71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGM 135
            :..:::..||.|:.:|.||..||.:..|.|....||.::..:|::.||||:||:.|||..|..|.
  Rat    95 MFGEKLNGTDPEDVIRNAFACFDEEAIGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGN 159

  Fly   136 INYEEF 141
            .||.||
  Rat   160 FNYIEF 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 51/136 (38%)
Myl12aXP_006245729.1 PTZ00184 31..169 CDD:185504 51/136 (38%)

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