DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Cabp2

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_574595.3 Gene:Cabp2 / 499298 RGDID:1563670 Length:221 Species:Rattus norvegicus


Alignment Length:150 Identity:62/150 - (41%)
Similarity:98/150 - (65%) Gaps:8/150 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            ||..|:|.|.:.||.:||::..|.|..||||..|||||..|||.||.::   ::..:.|:::|.:
  Rat    75 ELRPEEIEELQVAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEI---SQQISGGKVDFED 136

  Fly    68 FCGIMA-KQMRETDT---EEEMREAFKIFDRDGDGFISPAELRFVM-INLGEKVTDEEIDEMIRE 127
            |..:|. |.:.||..   ..|:|:||:.||.:|||.||..|||..: ..|||:::..|:||::::
  Rat   137 FVELMGPKLLAETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQD 201

  Fly   128 ADFDGDGMINYEEFVWMISQ 147
            .|.:|||::::||||.|:|:
  Rat   202 IDLNGDGLVDFEEFVRMMSR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 62/149 (42%)
Cabp2XP_574595.3 PTZ00184 75..219 CDD:185504 60/146 (41%)

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