DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp1a

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001315294.1 Gene:cabp1a / 449789 ZFINID:ZDB-GENE-041010-36 Length:379 Species:Danio rerio


Alignment Length:150 Identity:63/150 - (42%)
Similarity:96/150 - (64%) Gaps:5/150 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            ||..|:|.|.:|||.:|||:..|.|:.::||..|||:|..|||.||.:|..:...|..|.::|.:
Zfish   230 ELRPEEIDELRDAFKEFDKDKDGFISCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFED 294

  Fly    68 FCGIMA-KQMRETDTE---EEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIRE 127
            |..:|. |.:.||...   :|:|.|||.||.:|||.||..|||..|.. ||::|...::::::|:
Zfish   295 FVELMGPKLLAETADMIGIKELRNAFKEFDTNGDGEISTGELREAMRKLLGQQVGHRDLEDILRD 359

  Fly   128 ADFDGDGMINYEEFVWMISQ 147
            .|.:|||.:::||||.|:|:
Zfish   360 IDLNGDGRVDFEEFVRMVSR 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 63/149 (42%)
cabp1aNP_001315294.1 PTZ00184 230..377 CDD:185504 61/146 (42%)

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