DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp1b

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001002414.1 Gene:cabp1b / 436687 ZFINID:ZDB-GENE-040718-111 Length:167 Species:Danio rerio


Alignment Length:150 Identity:62/150 - (41%)
Similarity:97/150 - (64%) Gaps:5/150 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            ||..|::.|.::||.:|||:..|.|..::||..|||:|..|||.||.:|..:...|..|.::|.:
Zfish    18 ELRPEEMDELREAFKEFDKDKDGFIGCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFED 82

  Fly    68 FCGIMA-KQMRETDT---EEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIRE 127
            |..:|. |.:.||..   .:|:|:|||.||.:|||.||.||||..|.. ||::|...::::::|:
Zfish    83 FVELMGPKLLAETADMIGVKELRDAFKEFDTNGDGQISTAELREAMKKLLGQQVGHRDLEDILRD 147

  Fly   128 ADFDGDGMINYEEFVWMISQ 147
            .|.:|||.:::||||.|:|:
Zfish   148 IDLNGDGHVDFEEFVRMMSR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 62/149 (42%)
cabp1bNP_001002414.1 PTZ00184 18..165 CDD:185504 60/146 (41%)

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