DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cabp5a

DIOPT Version :9

Sequence 1:NP_001163737.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_956992.1 Gene:cabp5a / 393671 ZFINID:ZDB-GENE-040426-1655 Length:165 Species:Danio rerio


Alignment Length:149 Identity:67/149 - (44%)
Similarity:97/149 - (65%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            ||.:::|.|.::||.:|||:..|.|:.::||.||||:|..|||.||.:|......|..|:::|.:
Zfish    15 ELADDEIEELREAFNEFDKDKDGLISCKDLGNLMRTMGYMPTEMELIELGQNINMNLGGRVDFED 79

  Fly    68 FCGIMA-KQMRETD---TEEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIRE 127
            |..:|. |.:.||.   ..:|:|:|||.||.||||.|:..|||..|.. |||.:...|||.::||
Zfish    80 FVELMTPKLLAETAGMIGVKELRDAFKEFDMDGDGAITTEELRCAMTKLLGEHMNRREIDAVVRE 144

  Fly   128 ADFDGDGMINYEEFVWMIS 146
            ||.:|||.:::||||.|:|
Zfish   145 ADNNGDGTVDFEEFVKMLS 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_001163737.1 PTZ00184 3..148 CDD:185504 67/149 (45%)
EFh 11..73 CDD:238008 25/61 (41%)
EFh 84..146 CDD:238008 34/62 (55%)
cabp5aNP_956992.1 PTZ00184 15..164 CDD:185504 67/149 (45%)
EFh 23..85 CDD:238008 25/61 (41%)
EFh 100..163 CDD:238008 34/62 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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