DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Cabp5

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001102377.1 Gene:Cabp5 / 365194 RGDID:1308108 Length:173 Species:Rattus norvegicus


Alignment Length:149 Identity:67/149 - (44%)
Similarity:102/149 - (68%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
            |.:::|.|.::||::|||:..|.|:.::||.||||:|..|||.||.:|..:...|..|:::|.:|
  Rat    25 LGQDEIDELREAFLEFDKDRDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDF 89

  Fly    69 CGIMA-KQMRETD---TEEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIREA 128
            ..:|. |.:.||.   ..:|||:|||.||.:|||.|:.|||:..|.. ||||:|..||.|:::||
  Rat    90 VELMTPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEA 154

  Fly   129 DFDGDGMINYEEFVWMISQ 147
            |.:|||.:::||||.|:|:
  Rat   155 DINGDGTVDFEEFVKMMSR 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 67/149 (45%)
Cabp5NP_001102377.1 PTZ00184 25..171 CDD:185504 65/145 (45%)

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