DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Cabp5

DIOPT Version :9

Sequence 1:NP_001163737.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001102377.1 Gene:Cabp5 / 365194 RGDID:1308108 Length:173 Species:Rattus norvegicus


Alignment Length:149 Identity:67/149 - (44%)
Similarity:102/149 - (68%) Gaps:5/149 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
            |.:::|.|.::||::|||:..|.|:.::||.||||:|..|||.||.:|..:...|..|:::|.:|
  Rat    25 LGQDEIDELREAFLEFDKDRDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDF 89

  Fly    69 CGIMA-KQMRETD---TEEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIREA 128
            ..:|. |.:.||.   ..:|||:|||.||.:|||.|:.|||:..|.. ||||:|..||.|:::||
  Rat    90 VELMTPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEA 154

  Fly   129 DFDGDGMINYEEFVWMISQ 147
            |.:|||.:::||||.|:|:
  Rat   155 DINGDGTVDFEEFVKMMSR 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_001163737.1 PTZ00184 3..148 CDD:185504 67/149 (45%)
EFh 11..73 CDD:238008 25/61 (41%)
EFh 84..146 CDD:238008 35/62 (56%)
Cabp5NP_001102377.1 PTZ00184 25..171 CDD:185504 65/145 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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