DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and Ppp3r1

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_006251579.3 Gene:Ppp3r1 / 29748 RGDID:69230 Length:216 Species:Rattus norvegicus


Alignment Length:145 Identity:45/145 - (31%)
Similarity:80/145 - (55%) Gaps:9/145 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
            |....::|......|.:.|.:.:|.::..|..:|.. |.|||....:.|:.   :.:.||:::|.
  Rat    59 SHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPE-LQQNPLVQRVIDIF---DTDGNGEVDFK 119

  Fly    67 EFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAEL-RFVMINLGEKVTDEE----IDEMIR 126
            ||...:::...:.|.|:::|.||:|:|.|.||:||..|| :.:.:.:|..:.|.:    :|:.|.
  Rat   120 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 184

  Fly   127 EADFDGDGMINYEEF 141
            .||.||||.|::|||
  Rat   185 NADKDGDGRISFEEF 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 44/144 (31%)
Ppp3r1XP_006251579.3 FRQ1 66..203 CDD:444056 44/138 (32%)

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