DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and Tnnc2

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001032428.1 Gene:Tnnc2 / 296369 RGDID:1311973 Length:160 Species:Rattus norvegicus


Alignment Length:147 Identity:68/147 - (46%)
Similarity:100/147 - (68%) Gaps:3/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
            |.|:||.|||||.||..||.:|.|.|:.:||||:||.|||.||:.||..:|.|.:.:.:|.::|.
  Rat    10 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 74

  Fly    67 EFCGIMAKQMRET---DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128
            ||..:|.:||:|.   .:|||:.|.|:||||:.||:|...||..:....||.||||||:.::::.
  Rat    75 EFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDG 139

  Fly   129 DFDGDGMINYEEFVWMI 145
            |.:.||.|:::||:.|:
  Rat   140 DKNNDGRIDFDEFLKMM 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 67/146 (46%)
Tnnc2NP_001032428.1 PTZ00184 12..156 CDD:185504 66/143 (46%)

Return to query results.
Submit another query.