DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and cal-5

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_508864.2 Gene:cal-5 / 192083 WormBaseID:WBGene00006861 Length:156 Species:Caenorhabditis elegans


Alignment Length:148 Identity:49/148 - (33%)
Similarity:84/148 - (56%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
            :.|:.|:   :.|..|.:||..|.|.|...||..:|:.:||:|||.||..:...|:.:.:|.::|
 Worm    15 VGEIRED---DLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDF 76

  Fly    66 TEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
            .||. ::||   .......::..|:..|.||||:|:.:|||.....:|..::|::|..:.|..|.
 Worm    77 QEFL-VIAK---ANPLSLSLKAVFEELDVDGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQ 137

  Fly   131 DGDGMINYEEFVWMISQK 148
            :.||.||::||..|:::|
 Worm   138 NNDGKINFQEFCEMMTRK 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 48/144 (33%)
cal-5NP_508864.2 PTZ00184 22..155 CDD:185504 46/136 (34%)

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