DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acam and calm2

DIOPT Version :9

Sequence 1:NP_001163737.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001363414.1 Gene:calm2 / 100496298 XenbaseID:XB-GENE-976642 Length:149 Species:Xenopus tropicalis


Alignment Length:146 Identity:98/146 - (67%)
Similarity:126/146 - (86%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            :||||||||||:||..|||:|.|.|.|:||||:||:||||||||||||:|.|.:.:.||.::|.|
 Frog     4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68

  Fly    68 FCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDG 132
            |..:||::|::||:|||:||||::||:||:|:||.||||.||.|||||:||||:||||||||.||
 Frog    69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

  Fly   133 DGMINYEEFVWMISQK 148
            ||.:||||||.|::.|
 Frog   134 DGQVNYEEFVQMMTAK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_001163737.1 PTZ00184 3..148 CDD:185504 97/144 (67%)
EFh 11..73 CDD:238008 37/61 (61%)
EFh 84..146 CDD:238008 46/61 (75%)
calm2NP_001363414.1 PTZ00184 1..149 CDD:185504 97/144 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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