DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acam and calm2

DIOPT Version :10

Sequence 1:NP_476988.1 Gene:Acam / 44913 FlyBaseID:FBgn0011273 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001363414.1 Gene:calm2 / 100496298 XenbaseID:XB-GENE-976642 Length:149 Species:Xenopus tropicalis


Alignment Length:146 Identity:98/146 - (67%)
Similarity:126/146 - (86%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTE 67
            :||||||||||:||..|||:|.|.|.|:||||:||:||||||||||||:|.|.:.:.||.::|.|
 Frog     4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68

  Fly    68 FCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDG 132
            |..:||::|::||:|||:||||::||:||:|:||.||||.||.|||||:||||:||||||||.||
 Frog    69 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 133

  Fly   133 DGMINYEEFVWMISQK 148
            ||.:||||||.|::.|
 Frog   134 DGQVNYEEFVQMMTAK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcamNP_476988.1 PTZ00184 3..148 CDD:185504 97/144 (67%)
calm2NP_001363414.1 PTZ00184 1..149 CDD:185504 97/144 (67%)

Return to query results.
Submit another query.