DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Larp7 and LARP1a

DIOPT Version :9

Sequence 1:	NP_524795.2	Gene:	Larp7 / 44900	FlyBaseID:	FBgn0260771	Length:	595	Species:	Drosophila melanogaster
Sequence 2:	NP_001190354.1	Gene:	LARP1a / 832242	AraportID:	AT5G21160	Length:	833	Species:	Arabidopsis thaliana

Alignment Length:	408	Identity:	81/408 - (19%)
Similarity:	154/408 - (37%)	Gaps:	82/408 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 PEDASPDKKDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKT 105
            |...||:|.|        |.:.:..|:|:||.|.||..|.:|...::::.:||.:|...|.::|.
plant   268 PPILSPEKLD--------LRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKA 324

  Fly   106 LTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQRDVNDKTLYVEALPANATHDWLKEVFSRY 170
            :|.||..|..||..|..:|:...:  :::|.|..|....:.|:...|.:     .|..|:
plant   325 MTMDVDFIVYALGFSNSVEVQGDQ--IRKRDKWSDWIPASKKSTSAETI-----GDGDKD----- 377

  Fly   171 GPVAYVSLPHYPGTKKIKEFAFIEFEKSGSLEKAVKAFAQIQGVLSVETDPSDLASVRSFQQQQQ 235
            .|.:..|..::....|            ||.:..|..|:. :|..|..|:.....:::|...:::
plant   378 SPKSITSGDNFGNPSK------------GSSKPTVSDFSS-EGAQSSRTNNYKSGNLKSSADEKR 429

  Fly   236 IQQKAEQPQSEA----EQVELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETSTAGETASETD 296
            ..:......|..    |:::|..|:.::......:...:|...:.:::....:.....:.:.::|
plant   430 NVEDLSNDFSNTFLLDEELDLEHRSPRKSGLSMSKSIEYEDDDMAVDDQDIQKLVIVTQNSGKSD 494

  Fly   297 AEG----TAEASEQEDKTEATDG-----DEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKTSW 352
            ..|    .|:...:|..:...||     .|..|||..:||..:.:|..:.:..:.|
plant   495 GAGIGGTEAKNIPKELASTINDGLYYFEQELKKKRSGRRKNNSHLDTKDGKIKSGE--------- 550

  Fly   353 SSMRNKYLNLQRRIVSEAKSKLWRENH-------PQNQ-QHPHHQQTSH------PNHPKPSQLP 403
                    .|..::...:.:....|.|       .||: .|.||  |:|      .|......:.
plant   551 --------GLNTKLGENSAANDGGEEHGIITSRRKQNKGTHKHH--TAHARRFFSSNIRNNGNIS 605

  Fly   404 EAVKEEETG---GEVPSD 418
            |:......|   |..|.|
plant   606 ESPPSSSIGFFFGSTPPD 623

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Larp7	NP_524795.2	LA	57..135	CDD:128955	23/77 (30%)
		RRM	<116..>208	CDD:223796	17/91 (19%)
		RRM1_LARP7	148..>209	CDD:240736	9/60 (15%)
		RRM2_LARP7	471..548	CDD:240986
LARP1a	NP_001190354.1	LAM	279..351	CDD:153396	22/73 (30%)
		DM15	670..710	CDD:128927
		DM15	712..749	CDD:128927
		DM15	750..785	CDD:128927
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910