DRSC/TRiP Functional Genomics Resources

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Protein Alignment Larp7 and LARP6

DIOPT Version :10

Sequence 1:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_060827.2 Gene:LARP6 / 55323 HGNCID:24012 Length:491 Species:Homo sapiens


Alignment Length:414 Identity:100/414 - (24%)
Similarity:174/414 - (42%) Gaps:99/414 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KGEGQEPAT-------SAEKPDP----AAPTEPAEENSKEPAPEDASPDKKDGGRKRKRHLFNSI 63
            :|.| :||.       ||.:.:|    :..|....||.:|...::..|..::        |...:
Human    41 RGAG-DPARYLSPGWGSASEEEPSRGHSGTTASGGENEREDLEQEWKPPDEE--------LIKKL 96

  Fly    64 RGQMEFYFGDANLSKDRFLRRYVEQDP--YVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126
            ..|:||||.|.||.||.||.::|.::.  ||.:::..:|.|:|.||:|.:..|.||..|.:|||:
Human    97 VDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELN 161

  Fly   127 ETELKVKRRTKLP--DQRDVNDKTLYV------EALPANAT-----------HDWLKEVFSRYGP 172
            |...||:|.|.:|  ...::..|.|.|      ..|.|.||           .:.|.::|..:|.
Human   162 EDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGV 226

  Fly   173 VAYV-------SLPHYPGTKKIKEFAFIEFEKSGSLEKAVKAFAQIQGVLSVETDPSDLASVRSF 230
            ::.|       .||  |..::|..    .:.:.|:.|.|:..|.:::            |::::.
Human   227 ISSVRILKPGRELP--PDIRRISS----RYSQVGTQECAIVEFEEVE------------AAIKAH 273

  Fly   231 QQQQQIQQKAEQPQSEAEQVELPKRNLKREATDKDREE-----IHEVKRV--KLEEGQPSETSTA 288
            :......|..|..::....::.||   |:.|.||:.:|     ||..|.:  ::||.|.....::
Human   274 EFMITESQGKENMKAVLIGMKPPK---KKPAKDKNHDEEPTASIHLNKSLNKRVEELQYMGDESS 335

  Fly   289 GETASETDAEGTAEASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKTSWS 353
            ..::|:.::..|:..:.:.         .||..:......:.:...||..|..        :.||
Human   336 ANSSSDPESNPTSPMAGRR---------HAATNKLSPSGHQNLFLSPNASPCT--------SPWS 383

  Fly   354 SMRNKYLNLQRRIVSEAKSKLWRE 377
            |..     .||:.||. ||.|..|
Human   384 SPL-----AQRKGVSR-KSPLAEE 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Larp7NP_524795.2 LA 57..135 CDD:128955 32/79 (41%)
RRM1_LARP7 148..220 CDD:409732 18/95 (19%)
RRM2_LARP7 471..548 CDD:409958
LARP6NP_060827.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..87 11/46 (24%)
LARP_6 93..169 CDD:153402 31/75 (41%)
RRM_LARP6 184..292 CDD:409731 22/125 (18%)
Nuclear export signal 186..193 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..403 31/135 (23%)
Nuclear localization signal 296..302 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..491
SUZ-C 452..482 CDD:463745
Blue background indicates that the domain is not in the aligned region.

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