DRSC/TRiP Functional Genomics Resources

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Protein Alignment Larp7 and larp

DIOPT Version :10

Sequence 1:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_733244.5 Gene:larp / 53567 FlyBaseID:FBgn0261618 Length:1673 Species:Drosophila melanogaster


Alignment Length:430 Identity:84/430 - (19%)
Similarity:147/430 - (34%) Gaps:112/430 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126
            :|:.|:|:||...||:.|.||||.::.:.|:|:.:..:|:::..||.||..|..|:..|..|||.
  Fly   732 AIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELF 796

  Fly   127 ETELKVKRR--------TKLPDQRDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHYPG 183
            | ..||:.:        |::|:..:...|.:                     |.:....|....|
  Fly   797 E-GYKVRTKTTPTTWPITEVPEVNEGEPKAI---------------------GTLEQEQLEQNDG 839

  Fly   184 TKKIKEFAFIEFEKSGSLEKAVKAFAQIQGVLSVETD--PSDLASVRSFQQQQQIQQKAEQPQSE 246
            .:|::|                          ..|.|  |..|.|..:.:....|   ...|...
  Fly   840 QEKLEE--------------------------QTEADSPPPILTSAMATKPLNSI---PPPPMPR 875

  Fly   247 AEQVELPK----RNLKREATDKDREEIHEVKRVKLE-EGQPSETSTAGETASETDAEGTAEASEQ 306
            ..|..:||    :...|.:|......::.:..:..: ||..:|  .||..:...::......|..
  Fly   876 NPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQVEGGAAE--LAGHLSGLAESVKPKSTSTP 938

  Fly   307 EDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKTSWSSMRNKYLNLQRRIVSEAK 371
            :.:..|:.|:.|.                    ||..|...|:..|..::.:           :|
  Fly   939 DKRNAASAGNGAG--------------------SAAALVAEPEGIWKEVKRR-----------SK 972

  Fly   372 SKLWREN--HPQNQQHPHHQQTSHPNHPKPSQLPEAVKEEETGGEVPSDGGEGAVEAAPV--PAK 432
            :...:||  .|..||.|...||.:.|:........:.|.:.:....||:....|......  .:.
  Fly   973 TNAIKENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSNASSSATVCVTTNNASS 1037

  Fly   433 RRKAVHKMNM---------NFYGAGGVESTKSEEPSQERT 463
            ..||..|...         |...:|....:|:...|..:|
  Fly  1038 ATKATTKTTTTSTATTTTNNNIKSGNAAYSKTHSKSSSKT 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Larp7NP_524795.2 LA 57..135 CDD:128955 28/72 (39%)
RRM1_LARP7 148..220 CDD:409732 6/71 (8%)
RRM2_LARP7 471..548 CDD:409958
larpNP_733244.5 LARP_1_2 730..803 CDD:153403 28/71 (39%)
DM15 1341..1382 CDD:128927
DM15 1383..1421 CDD:128927
Blue background indicates that the domain is not in the aligned region.

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