DRSC/TRiP Functional Genomics Resources

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Protein Alignment Larp7 and larp7

DIOPT Version :9

Sequence 1:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_956224.1 Gene:larp7 / 334956 ZFINID:ZDB-GENE-030131-6896 Length:555 Species:Danio rerio


Alignment Length:632 Identity:167/632 - (26%)
Similarity:282/632 - (44%) Gaps:142/632 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QEPATSAEKPDPAAPTEPAEENSKEPAPEDASPDKKDGGRKRKRHLFNSIRGQMEFYFGDANLSK 78
            |......||......|..|:.:.|:        |.:...|.|.:.|.:.::.|:||:|||.||.|
Zfish     5 QRKTIDTEKMSSVGDTACADLSEKK--------DNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHK 61

  Fly    79 DRFLRRYVEQ--DPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPD- 140
            |||::..:||  |.|:.:.:..|||::|.||.||:.||:||.||.::|:::...:::|:..|.: 
Zfish    62 DRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGET 126

  Fly   141 QRDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSLEKAV 205
            .:||:.:|:|||.||...||.||:.|||:.|.|.|:|:|.|..|:..|.|||:|||.....:|||
Zfish   127 PKDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEFETQEQAQKAV 191

  Fly   206 KAFAQIQGVLSVETDPSDLASVRSFQQQQQIQQKA----EQPQSEAEQVELPKRNLKREATDK-- 264
            :..          .:|.:.|..:.....:..::||    ...|...|..:..|..||...:::  
Zfish   192 EML----------NNPPEDAPRKPGIFPKTCRKKAVPFDAVTQDNDEDGKKKKTELKNSTSEETG 246

  Fly   265 ----DREEIHEVKRVKLEEGQPSETSTAGETASE----------TDAEGTAEASE-----QEDKT 310
                |::.:.| ..|..|....:.|||..:.|.:          :..|...|.|.     :|:|:
Zfish   247 SNNMDQDGMLE-STVTSEPNLATLTSTVSKKAKKKRLRSQSFEASSGEDQFEMSSKMRKVEEEKS 310

  Fly   311 EATD---------------GDEAAKKRRRKRKKKAIVDKPNIEPSALELKVLPKTSWSSMRNKYL 360
            |..|               .|::..|.:|||||| :.::..:....:.|:||.|..|..::.:||
Zfish   311 ELKDLSSENKDEELNSLKKKDDSVLKAKRKRKKK-LKERLKVGEEVIPLRVLSKKEWLDLKQEYL 374

  Fly   361 NLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHPKPSQLPEAVKEEETGGEVPSDGGEGAVE 425
            .||:|.::..|..:::.|......|                 ...:||::|..            
Zfish   375 TLQKRCMAHLKQSVFQINQKPTNYH-----------------IVKLKEDDTNA------------ 410

  Fly   426 AAPVPAKRRKAVHKMNMNFYGAGGVESTKSEEPSQERTPLFKYEPGLIVECSLLKPCTNVKEFKA 490
                              ||         .:.|.:|.|...::..|:||:.|..:|..:.:..|.
Zfish   411 ------------------FY---------KDTPKKELTSGPEFLSGVIVKISYNQPLPSKRCIKD 448

  Fly   491 EMRQYPDIKYVDIKEGDQVALLRLGTPAAAEELL-------RQVNCSERQLKVLSGQQETLYWRK 548
            .:.:...:.|||:.:||....:|..:...|::::       ::.|.:   |::|||..|..||:|
Zfish   449 MLSELSPVAYVDLLDGDTEGHVRFKSSEDAQKVIKARFEFQKKYNWN---LELLSGDHERRYWQK 510

  Fly   549 IEQDREAKLSKKVRVQQKRGREKV-----------GKMLGKHIKFDD 584
            |..||:|||:  ...::|||.||:           .|....||:|||
Zfish   511 ILVDRQAKLN--TPREKKRGTEKLISKAEKIIIAKAKEASNHIRFDD 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Larp7NP_524795.2 LA 57..135 CDD:128955 32/79 (41%)
RRM <116..>208 CDD:223796 39/92 (42%)
RRM1_LARP7 148..>209 CDD:240736 30/60 (50%)
RRM2_LARP7 471..548 CDD:240986 21/83 (25%)
larp7NP_956224.1 LAM 38..119 CDD:295455 33/80 (41%)
RRM1_LARP7 134..212 CDD:240736 32/87 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..327 20/109 (18%)
RRM_3 429..527 CDD:285930 28/102 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596925
Domainoid 1 1.000 65 1.000 Domainoid score I10094
eggNOG 1 0.900 - - E33208_3BHGC
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3778
OMA 1 1.010 - - QHG47085
OrthoDB 1 1.010 - - D1499213at2759
OrthoFinder 1 1.000 - - FOG0007459
OrthoInspector 1 1.000 - - oto39069
orthoMCL 1 0.900 - - OOG6_105632
Panther 1 1.100 - - LDO PTHR22792
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R649
SonicParanoid 1 1.000 - - X6335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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