DRSC/TRiP Functional Genomics Resources

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Protein Alignment Larp7 and Larp7

DIOPT Version :9

Sequence 1:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_613059.2 Gene:Larp7 / 28036 MGIID:107634 Length:570 Species:Mus musculus


Alignment Length:638 Identity:170/638 - (26%)
Similarity:283/638 - (44%) Gaps:156/638 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ENSKEPAPEDASPDKKDGGRKRKR--HLFNSIRGQMEFYFGDANLSKDRFLRRYVE--QDPYVPL 94
            ||.|   ..:.|..:|:..:||.|  .:...|..|::|:||||||.||:|||..:|  :|.||.:
Mouse     4 ENQK---TMEESTKRKEEKKKRSRVKQVLADIAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDI 65

  Fly    95 EIFLTFNKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQ-RDVNDKTLYVEALPANA 158
            .:.::|||:|.||.|.:.||:||.:|.::|||....:::|:..|.:: :|..::|:|||.||.|.
Mouse    66 SLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLGERPKDEEERTVYVELLPKNV 130

  Fly   159 THDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFEKSGSLEKAVKAFAQIQ----------G 213
            ||.|::.||.:.|.|.|:|:|||..|...|.|||:|||   :.|:|.||...:.          |
Mouse   131 THSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFE---TKEQAAKAIEFLNNPPEEAPRKPG 192

  Fly   214 VLSVETDPSDLASVR-------------SFQQQQQIQQK--------------AEQPQ-----SE 246
            :.........:.|:|             ..::::.:|.|              .::|:     ||
Mouse   193 IFPKTVKNKPIPSLRVAEEKKKKKKKKGRIKKEESVQAKESAVDSSSSGVCKATKRPRTASEGSE 257

  Fly   247 AEQVELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETST--------------------AGET 291
            ||..|.||:..|::   |.|:::......:...|:....|.                    .|:.
Mouse   258 AETPEAPKQPAKKK---KKRDKVEASSLPEARAGKRERCSAEDEDCLPPRPKAKKRAQKDGVGQA 319

  Fly   292 ASETDAEG--TAEASEQEDKTEATDGDEAAK-KRRRKRKKKAIVDKPNIEPSALELKVLPKTSWS 353
            |||...|.  ....|.:|:|.....||..:| ||:.|:|.|   ::..:....:.|:||.||.|.
Mouse   320 ASEVSKESRDLEFCSTEEEKETDRKGDSLSKVKRKHKKKHK---ERHKMGEEVIPLRVLSKTEWM 381

  Fly   354 SMRNKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHPKPSQLPEAVKEEETGGEVPSD 418
            .::.:||.||:..::..|..:                         ||: :...|.||..:.|: 
Mouse   382 DLKKEYLALQKASMASLKKTI-------------------------SQI-KLESEMETDCKAPT- 419

  Fly   419 GGEGAVEAAPVPAKRRKAVHKMNMNFYGAGGVESTKSEEPSQERTPLFKYEPGLIVECSLLKPCT 483
                                        ||..:...::|....:.|  ::..|:||:....:|..
Mouse   420 ----------------------------AGSGQECSTQEKVSAQGP--QFVTGVIVKIVSGEPLP 454

  Fly   484 NVKEFKAEMRQYPDIKYVDIKEGDQVALLRLGTPAAAEELLR-QVNCSER---QLKVLSGQQETL 544
            ..|:.|..:....::.|:|:.|||.....|..||..|:.::. |....::   .|:||||..|..
Mouse   455 GRKQVKDILATISEVVYIDLLEGDTECHARFKTPEDAQAVMNAQTEIRKKHSWNLEVLSGDHEQR 519

  Fly   545 YWRKIEQDREAKLSKKVRVQQKRGREKV-----------GKMLGKHIKFDDGD 586
            ||:||..||:|||::.  .::|||.||:           .:...:||:|.:.|
Mouse   520 YWQKILVDRQAKLNQP--REKKRGTEKLITKAEKIRLAKTQQASQHIRFSEYD 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Larp7NP_524795.2 LA 57..135 CDD:128955 34/81 (42%)
RRM <116..>208 CDD:223796 39/92 (42%)
RRM1_LARP7 148..>209 CDD:240736 31/60 (52%)
RRM2_LARP7 471..548 CDD:240986 24/80 (30%)
Larp7NP_613059.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 5/19 (26%)
LARP_7 25..105 CDD:153401 35/83 (42%)
RRM1_LARP7 120..199 CDD:240736 33/101 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..364 45/248 (18%)
RRM_3 442..540 CDD:285930 33/101 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850874
Domainoid 1 1.000 66 1.000 Domainoid score I9904
eggNOG 1 0.900 - - E33208_3BHGC
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3870
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47085
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007459
OrthoInspector 1 1.000 - - otm44035
orthoMCL 1 0.900 - - OOG6_105632
Panther 1 1.100 - - LDO PTHR22792
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R649
SonicParanoid 1 1.000 - - X6335
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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