Protein Alignment Larp7 and Ssb

DIOPT Version :9

• Sequence 1: NP_524795.2
• Gene: Larp7 / 44900
• FlyBaseID: FBgn0260771
• Length: 595
• Species: Drosophila melanogaster
• Sequence 2: NP_001103615.1
• Gene: Ssb / 20823
• MGIID: 98423
• Length: 415
• Species: Mus musculus
• Alignment Length: 456
• Identity: 108/456 - (23%)
• Similarity: 188/456 - (41%)
• Gaps: 96/456 - (21%)

  Fly    49 KDGGRKRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDP-YVPLEIFLTFNKIKTLTQDVQQ 112
            ::|..::...|...|..|:|:||||.||.:|:||:..::.|. :||||..:.||::..||.|...
Mouse     3 ENGDNEKMTALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLETMIKFNRLNRLTTDFNV 67

  Fly   113 IAKALSNS--QLLELDETELKVKRRTK--LPD-----QRDVNDKTLYVEALPANATHDWLKEVFS 168
            |.:|||.|  :|:|:...:.|::|...  ||:     :.||.::::|::..|.:||.|.:||...
Mouse    68 IVQALSKSKAKLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLD 132

  Fly   169 RYGPVAYVSLP---HYPGTKKIKEFAFIEFEKSGSLEKAVKAFAQIQGVLSVETDPSDLASVRSF 230
            ..|.:..:.:.   |    |..|...|..|:   |::.| |.|.:|.|....:|:...|     |
Mouse   133 DKGQILNIQMRRTLH----KTFKGSIFAVFD---SIQSA-KKFVEIPGQKYKDTNLLIL-----F 184

  Fly   231 QQQQQIQQKAEQPQSEAEQVELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETST-------- 287
            ::....::..|:.||            |.||..|.::| ||.:.      :|..|.|
Mouse   185 KEDYFAKKNEERKQS------------KVEAKLKAKQE-HEGRH------KPGSTETRALEGKMG 230

  Fly   288 -----AGETASETDAEGTAEASEQEDKTEATDGDEAAKK---RRRKRKKKAIVDKPNIEPSALEL 344
                 :|:...:|..|..........:.:..|....||:   ..:::.|:|:....|.....|.|
Mouse   231 CLLKFSGDLDDQTCREDLHFLFSNHGEIKWVDFARGAKEGIILFKEKAKEALEKARNANNGNLLL 295

  Fly   345 KVLPKTSWSSMRNKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHP----KPSQLPEA 405
            : ..|.:|..       |:.....||..|:     ..:||...::..|...|.    |.|.:..|
Mouse   296 R-NKKVTWKV-------LEGHAEKEALKKI-----TDDQQESLNKWKSKGGHAGGRFKGSHVFTA 347

  Fly   406 VKEEETGGEVPSDGGEGAVEAAPVPAKRRKAVHKMNMNFYGAGGVESTKSEEPSQERTPLFKYEP 470
            .:..:..|:....|..||      |..|.:        |:|    ..|:.::..:.|.|:.:...
Mouse   348 ARRFKGKGKGNRPGYAGA------PKGRGQ--------FHG----RRTRFDDDDRRRGPMKRGRD 394

  Fly   471 G 471
            |
Mouse   395 G 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Larp7	NP_524795.2	LA	57..135	CDD:128955	31/80 (39%)
		RRM	<116..>208	CDD:223796	28/103 (27%)
		RRM1_LARP7	148..>209	CDD:240736	16/63 (25%)
		RRM2_LARP7	471..548	CDD:240986	1/1 (100%)
Ssb	NP_001103615.1	LARP_3	10..91	CDD:153397	31/80 (39%)
		RRM1_La	112..183	CDD:240737	20/78 (26%)
		RRM_3	230..333	CDD:285930	20/115 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	349..415		12/65 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R649
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.940